Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC172P0C7W6 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 MIR520E-201ENST00000384867 87 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 MIR660-201ENST00000385235 97 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 SNORD41-201ENST00000386967 70 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 MRPL42P3-201ENST00000401492 326 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AL034345.1-201ENST00000407768 123 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 RPS3AP3-201ENST00000411933 242 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AC005002.2-201ENST00000438228 269 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC172P0C7W6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC172P0C7W6 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 RNU6-311P-201ENST00000516224 102 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 FAM106DP-201ENST00000586416 501 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AC073349.3-201ENST00000617616 186 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
CCDC172P0C7W6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 RNU4-48P-201ENST00000365559 182 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 Y_RNA.399-201ENST00000383955 105 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 RNU6-17P-201ENST00000384245 107 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 RNU6-18P-201ENST00000384527 107 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 RNU6-195P-201ENST00000411352 109 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 RPS26P42-201ENST00000413485 326 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 MTND3P17-201ENST00000416968 344 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 ISCA1P6-201ENST00000427740 390 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AC245047.3-201ENST00000429428 127 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 BET1P1-201ENST00000482276 359 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AC025647.1-201ENST00000517879 253 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC172P0C7W6 AP000720.1-201ENST00000625091 483 ntBASIC0.61□□□□□ -2.31
CCDC172P0C7W6 OR4G1P-203ENST00000641984 1631 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCDC172P0C7W6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CCDC172P0C7W6 RNU5B-2P-201ENST00000363036 113 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 RNU6-1240P-201ENST00000365155 104 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AL355796.1-201ENST00000406706 323 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC172P0C7W6 GMFBP1-201ENST00000467831 427 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AC025465.4-201ENST00000513422 638 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AC010493.1-201ENST00000513479 292 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AC090049.2-201ENST00000550377 109 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AL022161.1-201ENST00000604390 213 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 Z84480.1-201ENST00000605131 311 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 snoZ196.1-201ENST00000625269 89 ntBASIC0.6□□□□□ -2.31
CCDC172P0C7W6 SNORA67.2-201ENST00000384300 149 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 MIR1276-201ENST00000408707 83 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC172P0C7W6 CDK8P2-201ENST00000415020 547 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC008134.1-201ENST00000420943 193 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 CETN4P-201ENST00000432407 469 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC009961.2-201ENST00000435771 251 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 SNRPFP3-201ENST00000457792 225 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 RNU7-21P-201ENST00000459430 62 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC172P0C7W6 RNU6-612P-201ENST00000516909 102 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC011604.1-201ENST00000545978 196 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC004584.2-201ENST00000570407 410 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 MIR4778-201ENST00000577635 80 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 BNIP3P39-201ENST00000601077 554 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AL162424.1-201ENST00000602325 221 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 AC006566.1-201ENST00000608943 513 ntBASIC0.59□□□□□ -2.31
CCDC172P0C7W6 MTND4P5-201ENST00000435821 1374 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 MTND4P4-201ENST00000439033 1366 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 RNU6-199P-201ENST00000362954 107 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 RNU6-1106P-201ENST00000390845 107 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC172P0C7W6 RNA5SP494-201ENST00000410653 129 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC172P0C7W6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.58□□□□□ -2.32
CCDC172P0C7W6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.58□□□□□ -2.32
CCDC172P0C7W6 AC007215.1-201ENST00000464893 276 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 RPL39P5-202ENST00000512505 151 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 AC007834.2-201ENST00000536310 343 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 AC068790.2-201ENST00000602601 557 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 MIR98-201ENST00000606724 119 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 AC068792.1-201ENST00000621354 417 ntBASIC0.58□□□□□ -2.32
CCDC172P0C7W6 RNU6-227P-201ENST00000362865 103 ntBASIC0.57□□□□□ -2.32
CCDC172P0C7W6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CCDC172P0C7W6 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CCDC172P0C7W6 RNU7-167P-201ENST00000459160 62 ntBASIC0.57□□□□□ -2.32
CCDC172P0C7W6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC172P0C7W6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC172P0C7W6 MIR548AB-201ENST00000584917 84 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms