Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL133216.2-202ENST00000634512 349 ntBASIC1.78□□□□□ -2.12
VIMP08670 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VIMP08670 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VIMP08670 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
VIMP08670 Y_RNA.319-201ENST00000365138 92 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-975P-201ENST00000384296 105 ntBASIC1.77□□□□□ -2.13
VIMP08670 MIR586-201ENST00000385035 97 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-510P-201ENST00000391239 108 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-174P-201ENST00000410406 106 ntBASIC1.77□□□□□ -2.13
VIMP08670 RPL21P111-201ENST00000418453 477 ntBASIC1.77□□□□□ -2.13
VIMP08670 RPL30P16-201ENST00000419341 429 ntBASIC1.77□□□□□ -2.13
VIMP08670 AL139396.1-201ENST00000421137 167 ntBASIC1.77□□□□□ -2.13
VIMP08670 AC060773.1-201ENST00000421698 310 ntBASIC1.77□□□□□ -2.13
VIMP08670 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.77□□□□□ -2.13
VIMP08670 AL445646.1-201ENST00000431784 216 ntBASIC1.77□□□□□ -2.13
VIMP08670 AL445305.1-201ENST00000432577 575 ntBASIC1.77□□□□□ -2.13
VIMP08670 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.77□□□□□ -2.13
VIMP08670 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.77□□□□□ -2.13
VIMP08670 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
VIMP08670 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
VIMP08670 AC107393.1-201ENST00000512403 346 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-970P-201ENST00000516312 107 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-948P-201ENST00000516374 107 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU2-34P-201ENST00000516534 121 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU1-117P-201ENST00000517041 158 ntBASIC1.77□□□□□ -2.13
VIMP08670 RNU6-58P-201ENST00000517143 103 ntBASIC1.77□□□□□ -2.13
VIMP08670 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.77□□□□□ -2.13
VIMP08670 AC060780.3-201ENST00000589464 80 ntBASIC1.77□□□□□ -2.13
VIMP08670 AL158827.2-201ENST00000602494 330 ntBASIC1.77□□□□□ -2.13
VIMP08670 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.77□□□□□ -2.13
VIMP08670 AL691447.3-201ENST00000635020 330 ntBASIC1.77□□□□□ -2.13
VIMP08670 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
VIMP08670 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
VIMP08670 AL356292.1-201ENST00000283110 373 ntBASIC1.76□□□□□ -2.13
VIMP08670 MIR126-201ENST00000362291 85 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU4-82P-201ENST00000362443 140 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU6-596P-201ENST00000365395 98 ntBASIC1.76□□□□□ -2.13
VIMP08670 AL356776.1-201ENST00000406574 447 ntBASIC1.76□□□□□ -2.13
VIMP08670 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VIMP08670 MTND5P5-201ENST00000503764 376 ntBASIC1.76□□□□□ -2.13
VIMP08670 AC011406.1-201ENST00000512440 370 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU6-358P-201ENST00000516564 75 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNA5SP384-201ENST00000516615 116 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU6-344P-201ENST00000516635 111 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU6-1198P-201ENST00000516904 67 ntBASIC1.76□□□□□ -2.13
VIMP08670 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.76□□□□□ -2.13
VIMP08670 AC027288.2-201ENST00000553028 243 ntBASIC1.76□□□□□ -2.13
VIMP08670 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.76□□□□□ -2.13
VIMP08670 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.76□□□□□ -2.13
VIMP08670 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.76□□□□□ -2.13
VIMP08670 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.76□□□□□ -2.13
VIMP08670 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-17P-201ENST00000384245 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-842P-201ENST00000384269 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 SNORA67.2-201ENST00000384300 149 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-18P-201ENST00000384527 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-1235P-201ENST00000384559 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-296P-201ENST00000384608 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-541P-201ENST00000384709 110 ntBASIC1.75□□□□□ -2.13
VIMP08670 AL079342.1-201ENST00000401460 267 ntBASIC1.75□□□□□ -2.13
VIMP08670 AL033519.2-201ENST00000403958 392 ntBASIC1.75□□□□□ -2.13
VIMP08670 AL117342.1-201ENST00000404861 406 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU2-2P-201ENST00000410396 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 Y_RNA.619-201ENST00000410951 90 ntBASIC1.75□□□□□ -2.13
VIMP08670 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.75□□□□□ -2.13
VIMP08670 FGF7P6-202ENST00000451282 293 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-498P-201ENST00000459468 107 ntBASIC1.75□□□□□ -2.13
VIMP08670 AC018710.1-201ENST00000506509 158 ntBASIC1.75□□□□□ -2.13
VIMP08670 AC116337.1-201ENST00000509680 687 ntBASIC1.75□□□□□ -2.13
VIMP08670 SNORA25.14-201ENST00000516481 132 ntBASIC1.75□□□□□ -2.13
VIMP08670 MTND4LP26-201ENST00000518144 282 ntBASIC1.75□□□□□ -2.13
VIMP08670 7SK.7-201ENST00000603504 247 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.15-201ENST00000611544 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.16-201ENST00000613119 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.12-201ENST00000613778 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.20-201ENST00000613956 192 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.9-201ENST00000615427 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.11-201ENST00000616345 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.2-201ENST00000616535 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.3-201ENST00000617785 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.19-201ENST00000618602 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU2-1-201ENST00000618664 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.6-201ENST00000619225 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.5-201ENST00000619465 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 U2.10-201ENST00000620268 191 ntBASIC1.75□□□□□ -2.13
VIMP08670 RNU6-873P-201ENST00000363833 107 ntBASIC1.74□□□□□ -2.13
VIMP08670 RNU1-96P-201ENST00000364163 162 ntBASIC1.74□□□□□ -2.13
VIMP08670 RNU6-245P-201ENST00000384020 107 ntBASIC1.74□□□□□ -2.13
VIMP08670 RNA5SP504-201ENST00000410676 117 ntBASIC1.74□□□□□ -2.13
VIMP08670 MTND3P8-201ENST00000412909 339 ntBASIC1.74□□□□□ -2.13
VIMP08670 SNORD5.1-201ENST00000458800 75 ntBASIC1.74□□□□□ -2.13
VIMP08670 RNU7-57P-201ENST00000459540 60 ntBASIC1.74□□□□□ -2.13
VIMP08670 AC008834.1-201ENST00000511612 175 ntBASIC1.74□□□□□ -2.13
VIMP08670 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.74□□□□□ -2.13
VIMP08670 UBL5P4-201ENST00000562584 236 ntBASIC1.74□□□□□ -2.13
VIMP08670 MIR4672-201ENST00000583126 81 ntBASIC1.74□□□□□ -2.13
VIMP08670 AC069114.2-201ENST00000604699 304 ntBASIC1.74□□□□□ -2.13
VIMP08670 AC116312.1-201ENST00000606841 314 ntBASIC1.74□□□□□ -2.13
VIMP08670 AC126177.8-201ENST00000618339 1015 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms