Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.78□□□□□ -2.29
COL4A2P08572 snoU13.30-201ENST00000458951 104 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A2P08572 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A2P08572 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 RNU6-902P-201ENST00000517212 91 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.78□□□□□ -2.29
COL4A2P08572 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.78□□□□□ -2.29
COL4A2P08572 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.78□□□□□ -2.29
COL4A2P08572 HIF1AP1-201ENST00000553642 175 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 SUB1P2-201ENST00000556401 297 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.78□□□□□ -2.29
COL4A2P08572 AC004223.2-201ENST00000590309 544 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC087752.4-201ENST00000605911 462 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 AC009994.1-201ENST00000606889 253 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 TCL6_2.1-201ENST00000615162 119 ntBASIC0.78□□□□□ -2.29
COL4A2P08572 MIR340-201ENST00000362125 95 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 MIR194-1-201ENST00000384892 85 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 SNORD73A-201ENST00000386062 65 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 MIR300-201ENST00000401138 83 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 CDK8P2-201ENST00000415020 547 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC060773.1-201ENST00000421698 310 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC099677.2-201ENST00000436385 175 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC073910.1-201ENST00000445047 438 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 TPTE2P5-203ENST00000458118 728 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AL163973.1-201ENST00000484753 577 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC060788.1-201ENST00000521318 469 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 RNU6-323P-201ENST00000521915 107 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.77□□□□□ -2.29
COL4A2P08572 FGF7P1-201ENST00000582820 288 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 NIFKP6-201ENST00000598115 845 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC073648.5-201ENST00000603502 305 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 SNRPGP20-201ENST00000604477 205 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AP001485.1-201ENST00000604799 199 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.77□□□□□ -2.29
COL4A2P08572 AP001596.2-201ENST00000608410 312 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AC008147.4-201ENST00000617570 1204 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 AL109933.3-201ENST00000619095 188 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 OR5AK4P-201ENST00000635912 903 ntBASIC0.77□□□□□ -2.29
COL4A2P08572 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL4A2P08572 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
COL4A2P08572 RNU5A-6P-201ENST00000384136 116 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 RNU6-296P-201ENST00000384608 107 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AL117339.3-201ENST00000418733 162 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 RPL30P13-201ENST00000418873 348 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 MTCO2P34-201ENST00000421994 607 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A2P08572 MTCYBP8-201ENST00000422855 651 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AC098934.3-201ENST00000430450 190 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.76□□□□□ -2.29
COL4A2P08572 AL135790.2-201ENST00000437701 267 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 C1DP4-201ENST00000455429 424 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AC016925.1-201ENST00000458303 298 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 RNU7-63P-201ENST00000459054 62 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 U8.21-201ENST00000459536 136 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.76□□□□□ -2.29
COL4A2P08572 AC021146.2-201ENST00000504736 556 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 RAB11AP2-201ENST00000545905 639 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 AC145350.1-201ENST00000567426 208 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 MIR5006-201ENST00000583027 110 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.76□□□□□ -2.29
COL4A2P08572 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 MIR8087-201ENST00000612745 78 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.76□□□□□ -2.29
COL4A2P08572 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A2P08572 RNU1-96P-201ENST00000364163 162 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 Y_RNA.296-201ENST00000364930 108 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 VTRNA1-3-201ENST00000365645 89 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MIR208B-201ENST00000401172 77 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 CST2P1-201ENST00000425770 87 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A2P08572 USP9YP29-201ENST00000445112 563 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 RNU6-1041P-201ENST00000516254 102 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A2P08572 AGGF1P4-201ENST00000568249 801 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC063944.3-201ENST00000609969 533 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 HULC.1-201ENST00000612720 240 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MIR8065-201ENST00000620577 100 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 Z69908.1-201ENST00000622603 247 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC091925.1-201ENST00000623204 462 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC078883.4-201ENST00000623218 367 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AC068205.3-201ENST00000636385 468 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 RNU6-227P-201ENST00000362865 103 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 RNU6-1317P-201ENST00000364582 104 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 SNORA25.8-201ENST00000364831 128 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 Y_RNA.294-201ENST00000364916 102 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 SNORA32.2-201ENST00000384049 122 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 AL161935.2-201ENST00000414627 60 ntBASIC0.75□□□□□ -2.29
COL4A2P08572 MTCO3P29-201ENST00000432119 779 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms