Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC073901.1-201ENST00000462471 408 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 SNORA40.9-201ENST00000515895 93 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 RNU7-110P-201ENST00000516891 62 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 SNORA81.3-201ENST00000517283 198 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 MZT1P2-201ENST00000604387 248 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 AL356157.2-201ENST00000605122 111 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DOAP06340 U2.14-201ENST00000615943 113 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 AL590808.1-201ENST00000618696 141 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DOAP06340 ZNF204P-201ENST00000416749 2397 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DOAP06340 RNU6-799P-201ENST00000363567 107 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 RNY1-201ENST00000364228 113 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 SNORA14A-201ENST00000364773 135 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 Y_RNA.446-201ENST00000384178 104 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 RNU4-70P-201ENST00000384579 139 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 MIR518C-201ENST00000384822 101 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 MIR147B-201ENST00000390185 80 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 SNORA26.3-201ENST00000391119 136 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 AC009963.1-201ENST00000417265 157 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 AL358075.3-201ENST00000426289 226 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 AP001324.2-201ENST00000461163 319 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 AC103975.1-201ENST00000482506 483 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 RPS23P5-201ENST00000495419 428 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 SNORD19.2-201ENST00000516978 73 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 MIR4423-201ENST00000580922 80 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 HAUS6P2-201ENST00000433254 2404 ntBASIC2.99□□□□□ -1.93
HLA-DOAP06340 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HLA-DOAP06340 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC008264.2-201ENST00000610193 3731 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 RNU4-90P-201ENST00000362773 141 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 Y_RNA.117-201ENST00000363294 101 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 OOSP1P1-201ENST00000423265 274 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC078809.1-201ENST00000427601 140 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC009237.7-201ENST00000447357 229 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 TRBV12-1-201ENST00000479785 344 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 RPS27P26-201ENST00000494583 239 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC016256.1-201ENST00000547971 354 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 RPL21P9-201ENST00000556149 474 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC021231.3-201ENST00000558497 370 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 RPS15AP11-201ENST00000594193 385 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 BX284668.6-201ENST00000606899 438 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC004792.1-201ENST00000614523 137 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 AC127459.3-201ENST00000624328 466 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 SNORD98-201ENST00000636377 67 ntBASIC2.98□□□□□ -1.93
HLA-DOAP06340 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DOAP06340 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DOAP06340 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DOAP06340 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC092268.1-201ENST00000342691 405 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU6-727P-201ENST00000363592 107 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 SNORD115-8-201ENST00000363856 82 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 Y_RNA.200-201ENST00000364018 102 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU6-740P-201ENST00000364734 105 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 SNORD115-38-201ENST00000365037 82 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU6-1175P-201ENST00000365200 107 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU6-487P-201ENST00000365430 104 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 Y_RNA.418-201ENST00000384029 102 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU6-748P-201ENST00000384648 107 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 Y_RNA.570-201ENST00000384750 101 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 MIR181B1-201ENST00000385240 110 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNA5SP210-201ENST00000391034 120 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 MIR1298-201ENST00000408783 112 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC104389.3-201ENST00000445629 235 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 MRPS10P1-201ENST00000448483 130 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC112771.1-201ENST00000463581 102 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU5F-2P-201ENST00000516066 82 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 SNORD116-28-201ENST00000516123 91 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 RNU4-71P-201ENST00000516258 113 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 SNORA25.14-201ENST00000516481 132 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 SNORD53-201ENST00000579969 78 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DOAP06340 AL391813.1-201ENST00000603098 260 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC098479.1-201ENST00000609225 154 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC002064.3-201ENST00000623448 346 ntBASIC2.97□□□□□ -1.93
HLA-DOAP06340 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DOAP06340 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DOAP06340 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 RNU6-1062P-201ENST00000383908 107 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 Y_RNA.785-201ENST00000384290 109 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 MIR767-201ENST00000390228 109 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 RN7SKP284-201ENST00000411002 343 ntBASIC2.96□□□□□ -1.94
HLA-DOAP06340 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DOAP06340 AC009969.1-201ENST00000438726 172 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms