Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF114P1-201ENST00000453500 292 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 RPS29P15-201ENST00000458329 171 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 RNU6-947P-201ENST00000516264 106 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 uc_338.11-201ENST00000619132 160 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 MIR8054-201ENST00000620877 86 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RNU6-108P-201ENST00000365558 107 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 MIR586-201ENST00000385035 97 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 MIR653-201ENST00000385279 96 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RN7SKP200-201ENST00000410564 320 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RNA5SP247-201ENST00000411181 105 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 AC106883.1-201ENST00000418805 562 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DQB2P05538 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 UBE2D3P4-201ENST00000441973 436 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RNA5SP255-201ENST00000516370 107 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 MTND1P8-201ENST00000571424 950 ntBASIC0.5□□□□□ -2.33
HLA-DQB2P05538 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
HLA-DQB2P05538 RNY4P34-201ENST00000364779 95 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 RNU4-12P-201ENST00000365233 139 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 Y_RNA.399-201ENST00000383955 105 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 MIR1-2-201ENST00000384961 85 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 RNU6-57P-201ENST00000411348 103 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 RNU6-195P-201ENST00000411352 109 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 MTND3P17-201ENST00000416968 344 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 MTCO2P34-201ENST00000421994 607 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AC005002.2-201ENST00000438228 269 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 RNU6-323P-201ENST00000521915 107 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 ELOCP32-201ENST00000548625 324 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AC146944.4-201ENST00000602697 718 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AC080078.2-201ENST00000603766 501 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AL022161.1-201ENST00000604390 213 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 AP000720.1-201ENST00000625091 483 ntBASIC0.49□□□□□ -2.33
HLA-DQB2P05538 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HLA-DQB2P05538 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU5B-2P-201ENST00000363036 113 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU6-1097P-201ENST00000363586 107 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU6-1305P-201ENST00000364353 104 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU1-133P-201ENST00000364867 167 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 MIR660-201ENST00000385235 97 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RPS3AP3-201ENST00000411933 242 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 AC009961.2-201ENST00000435771 251 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 MTCO3P8-201ENST00000453691 755 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.48□□□□□ -2.33
HLA-DQB2P05538 GMFBP1-201ENST00000467831 427 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 COX6CP6-201ENST00000490840 228 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 HMGB1P29-201ENST00000505659 499 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RPL39P5-202ENST00000512505 151 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU1-142P-201ENST00000516682 145 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 AC069113.1-201ENST00000517763 267 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 AC068790.2-201ENST00000602601 557 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 AL078603.1-201ENST00000603824 313 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 AL359075.3-201ENST00000613288 217 ntBASIC0.48□□□□□ -2.33
HLA-DQB2P05538 RNU4-76P-201ENST00000364509 141 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU4-48P-201ENST00000365559 182 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 SNORA67.2-201ENST00000384300 149 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU6-440P-201ENST00000390882 105 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AL355796.1-201ENST00000406706 323 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AC245047.3-201ENST00000429428 127 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 MTCO2P3-201ENST00000442543 421 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 SCARNA18-201ENST00000459004 134 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU7-57P-201ENST00000459540 60 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RPS29P27-201ENST00000463711 170 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RPS27P22-201ENST00000478056 241 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AC025465.4-201ENST00000513422 638 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU6-311P-201ENST00000516224 102 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU6-405P-201ENST00000516637 110 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 RNU7-128P-201ENST00000517247 62 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AC025647.1-201ENST00000517879 253 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AP003461.1-201ENST00000528866 78 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 APOOP3-201ENST00000536787 586 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 MIR4778-201ENST00000577635 80 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 MIR3941-201ENST00000582572 103 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 Z84480.1-201ENST00000605131 311 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AP001596.2-201ENST00000608410 312 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 AC073349.3-201ENST00000617616 186 ntBASIC0.47□□□□□ -2.33
HLA-DQB2P05538 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms