Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC106754.1-201ENST00000562632 1513 ntBASIC0.53□□□□□ -2.33
APOA1P02647 RNU6-227P-201ENST00000362865 103 ntBASIC0.52□□□□□ -2.33
APOA1P02647 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
APOA1P02647 Y_RNA.399-201ENST00000383955 105 ntBASIC0.52□□□□□ -2.33
APOA1P02647 SNORD73A-201ENST00000386062 65 ntBASIC0.52□□□□□ -2.33
APOA1P02647 SNORA75.2-201ENST00000391138 150 ntBASIC0.52□□□□□ -2.33
APOA1P02647 SNORA75.3-201ENST00000391231 150 ntBASIC0.52□□□□□ -2.33
APOA1P02647 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.52□□□□□ -2.33
APOA1P02647 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
APOA1P02647 RNU7-167P-201ENST00000459160 62 ntBASIC0.52□□□□□ -2.33
APOA1P02647 RNU6-221P-201ENST00000459541 99 ntBASIC0.52□□□□□ -2.33
APOA1P02647 GMFBP1-201ENST00000467831 427 ntBASIC0.52□□□□□ -2.33
APOA1P02647 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
APOA1P02647 AC105417.1-201ENST00000514691 285 ntBASIC0.52□□□□□ -2.33
APOA1P02647 RNU6-917P-201ENST00000516294 104 ntBASIC0.52□□□□□ -2.33
APOA1P02647 MIR4781-201ENST00000585250 76 ntBASIC0.52□□□□□ -2.33
APOA1P02647 BNIP3P39-201ENST00000601077 554 ntBASIC0.52□□□□□ -2.33
APOA1P02647 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
APOA1P02647 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.52□□□□□ -2.33
APOA1P02647 OR4G1P-203ENST00000641984 1631 ntBASIC0.52□□□□□ -2.33
APOA1P02647 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
APOA1P02647 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
APOA1P02647 SNORD116-13-201ENST00000384408 92 ntBASIC0.51□□□□□ -2.33
APOA1P02647 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
APOA1P02647 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.51□□□□□ -2.33
APOA1P02647 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.51□□□□□ -2.33
APOA1P02647 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.51□□□□□ -2.33
APOA1P02647 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.51□□□□□ -2.33
APOA1P02647 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.51□□□□□ -2.33
APOA1P02647 STAG3L5P-204ENST00000443759 179 ntBASIC0.51□□□□□ -2.33
APOA1P02647 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.51□□□□□ -2.33
APOA1P02647 MTND2P32-201ENST00000521584 1038 ntBASIC0.51□□□□□ -2.33
APOA1P02647 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.51□□□□□ -2.33
APOA1P02647 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
APOA1P02647 MIR3945-201ENST00000581853 98 ntBASIC0.51□□□□□ -2.33
APOA1P02647 AC012557.2-201ENST00000605919 418 ntBASIC0.51□□□□□ -2.33
APOA1P02647 AC009229.3-201ENST00000608056 282 ntBASIC0.51□□□□□ -2.33
APOA1P02647 U2.17-201ENST00000611454 95 ntBASIC0.51□□□□□ -2.33
APOA1P02647 MIR6835-201ENST00000621552 64 ntBASIC0.51□□□□□ -2.33
APOA1P02647 CASC19-280ENST00000642102 1351 ntBASIC0.51□□□□□ -2.33
APOA1P02647 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
APOA1P02647 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.5□□□□□ -2.33
APOA1P02647 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.5□□□□□ -2.33
APOA1P02647 MTND3P9-201ENST00000429526 346 ntBASIC0.5□□□□□ -2.33
APOA1P02647 AL591806.2-201ENST00000433122 173 ntBASIC0.5□□□□□ -2.33
APOA1P02647 AC009961.2-201ENST00000435771 251 ntBASIC0.5□□□□□ -2.33
APOA1P02647 AC010095.1-201ENST00000443543 144 ntBASIC0.5□□□□□ -2.33
APOA1P02647 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.5□□□□□ -2.33
APOA1P02647 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.5□□□□□ -2.33
APOA1P02647 RNU1-117P-201ENST00000517041 158 ntBASIC0.5□□□□□ -2.33
APOA1P02647 RNU7-128P-201ENST00000517247 62 ntBASIC0.5□□□□□ -2.33
APOA1P02647 AC025449.1-201ENST00000603896 529 ntBASIC0.5□□□□□ -2.33
APOA1P02647 AC008873.1-201ENST00000625051 138 ntBASIC0.5□□□□□ -2.33
APOA1P02647 MTND4P4-201ENST00000439033 1366 ntBASIC0.49□□□□□ -2.33
APOA1P02647 MIR378A-201ENST00000362177 66 ntBASIC0.49□□□□□ -2.33
APOA1P02647 SNORA67.2-201ENST00000384300 149 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
APOA1P02647 RPS29P27-201ENST00000463711 170 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AC007215.1-201ENST00000464893 276 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AL049830.1-201ENST00000468034 425 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AP002001.1-203ENST00000534002 267 ntBASIC0.49□□□□□ -2.33
APOA1P02647 AL137100.2-201ENST00000555786 315 ntBASIC0.49□□□□□ -2.33
APOA1P02647 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
APOA1P02647 RNU6-1335P-201ENST00000365426 107 ntBASIC0.48□□□□□ -2.33
APOA1P02647 RNU6-1286P-201ENST00000383871 107 ntBASIC0.48□□□□□ -2.33
APOA1P02647 MIR320B2-201ENST00000408479 138 ntBASIC0.48□□□□□ -2.33
APOA1P02647 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.48□□□□□ -2.33
APOA1P02647 AL445305.1-201ENST00000432577 575 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.48□□□□□ -2.33
APOA1P02647 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.48□□□□□ -2.33
APOA1P02647 AC022364.2-201ENST00000457963 554 ntBASIC0.48□□□□□ -2.33
APOA1P02647 RNU6-1037P-201ENST00000459571 107 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AC098869.1-201ENST00000481627 292 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
APOA1P02647 RNU6-113P-201ENST00000516653 101 ntBASIC0.48□□□□□ -2.33
APOA1P02647 RN7SKP219-201ENST00000516825 296 ntBASIC0.48□□□□□ -2.33
APOA1P02647 RNA5SP454-201ENST00000517231 127 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.48□□□□□ -2.33
APOA1P02647 BNIP3P10-201ENST00000605360 577 ntBASIC0.48□□□□□ -2.33
APOA1P02647 SNORA28-201ENST00000606769 126 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AP001596.2-201ENST00000608410 312 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AL391834.2-201ENST00000609982 546 ntBASIC0.48□□□□□ -2.33
APOA1P02647 AC139792.3-201ENST00000623525 224 ntBASIC0.48□□□□□ -2.33
APOA1P02647 MIR373-201ENST00000362273 69 ntBASIC0.47□□□□□ -2.33
APOA1P02647 SNORA2.2-201ENST00000365473 135 ntBASIC0.47□□□□□ -2.33
APOA1P02647 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
APOA1P02647 MIR1261-201ENST00000408659 82 ntBASIC0.47□□□□□ -2.33
APOA1P02647 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.47□□□□□ -2.33
APOA1P02647 MTCO2P34-201ENST00000421994 607 ntBASIC0.47□□□□□ -2.33
APOA1P02647 AL354692.1-201ENST00000423044 315 ntBASIC0.47□□□□□ -2.33
APOA1P02647 AL593851.1-201ENST00000426171 157 ntBASIC0.47□□□□□ -2.33
APOA1P02647 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.47□□□□□ -2.33
APOA1P02647 RNU7-138P-201ENST00000459479 64 ntBASIC0.47□□□□□ -2.33
APOA1P02647 RNU7-94P-201ENST00000459576 63 ntBASIC0.47□□□□□ -2.33
APOA1P02647 MTND2P14-201ENST00000482139 351 ntBASIC0.47□□□□□ -2.33
APOA1P02647 AL163540.1-201ENST00000485382 386 ntBASIC0.47□□□□□ -2.33
APOA1P02647 RNU7-99P-201ENST00000516271 62 ntBASIC0.47□□□□□ -2.33
APOA1P02647 PRELID3BP2-201ENST00000605362 201 ntBASIC0.47□□□□□ -2.33
APOA1P02647 RMST_3.1-201ENST00000611651 109 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms