Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OR9P1P-201ENST00000496431 281 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 MTCO3P9-201ENST00000506989 781 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AC112206.4-201ENST00000515142 405 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.31□□□□□ -2.46
SPTA1P02549 AC010525.2-201ENST00000590920 195 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AL136317.1-201ENST00000612653 226 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.31□□□□□ -2.46
SPTA1P02549 RNU6-679P-201ENST00000391003 106 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.32□□□□□ -2.46
SPTA1P02549 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPTA1P02549 MTND1P31-201ENST00000449206 961 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RPS23P5-201ENST00000495419 428 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 SNORA40.12-201ENST00000516329 111 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 MTND2P7-201ENST00000521337 640 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RMST_10.1-201ENST00000616309 154 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNA5SP517-201ENST00000364724 117 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNU6-395P-201ENST00000365662 106 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 MIR544A-201ENST00000384855 91 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 SNORD65.1-201ENST00000390889 71 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNA5SP109-201ENST00000391010 116 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 SNORD111-201ENST00000408139 94 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNA5SP390-201ENST00000410191 113 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 AL353997.1-201ENST00000432936 108 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 AC073910.1-201ENST00000445047 438 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 AC010486.2-201ENST00000505572 483 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPTA1P02549 AC091885.1-201ENST00000506658 268 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNA5SP268-201ENST00000516828 124 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPTA1P02549 AC024995.1-201ENST00000523014 93 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 BNIP3P9-201ENST00000603714 553 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 MIR1295B-201ENST00000636144 60 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 U6.108-201ENST00000637764 58 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.32□□□□□ -2.46
SPTA1P02549 RNU6-199P-201ENST00000362954 107 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 MIR16-1-201ENST00000385271 89 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RPS20P2-201ENST00000402520 389 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 MIR1305-201ENST00000408300 86 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 CDK8P2-201ENST00000415020 547 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPTA1P02549 ZNF885P-201ENST00000420174 1098 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPTA1P02549 AC244670.1-201ENST00000436879 112 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AL356094.1-201ENST00000624663 1212 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RNU6-331P-201ENST00000384724 107 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RNU6-278P-201ENST00000390945 109 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPTA1P02549 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
SPTA1P02549 AC104563.1-201ENST00000476147 376 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 SNORA70.12-201ENST00000516084 153 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RNU6-448P-201ENST00000517052 107 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 RNU2-60P-201ENST00000517290 128 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AC105185.1-201ENST00000518705 535 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 LRRC34P1-201ENST00000542742 915 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 DPPA3P3-201ENST00000603842 430 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AL022154.1-201ENST00000604698 785 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 AC104985.3-201ENST00000623479 597 ntBASIC-0.33□□□□□ -2.46
SPTA1P02549 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 BX664727.1-201ENST00000416024 466 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPTA1P02549 RNA5SP94-201ENST00000516917 108 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.34□□□□□ -2.46
SPTA1P02549 AP002453.2-201ENST00000533503 320 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC091135.1-201ENST00000585943 307 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC004832.4-201ENST00000608952 331 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 U8.5-201ENST00000364528 136 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 MIR891A-201ENST00000401237 79 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 RNU6-293P-201ENST00000411259 106 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC027644.1-201ENST00000419595 298 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC093019.1-201ENST00000443135 252 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 MTCO1P27-201ENST00000448269 226 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPTA1P02549 MRPL42P4-201ENST00000453267 443 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.34□□□□□ -2.46
SPTA1P02549 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPTA1P02549 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPTA1P02549 MTND1P15-201ENST00000579262 949 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC078795.3-201ENST00000602913 472 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC104458.1-201ENST00000608243 463 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC107905.1-201ENST00000616204 426 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 AC010975.3-201ENST00000618727 978 ntBASIC-0.34□□□□□ -2.46
SPTA1P02549 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.46
SPTA1P02549 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 SNORA26.3-201ENST00000391119 136 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 AL049545.1-201ENST00000401856 572 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 RNU6-994P-201ENST00000410507 111 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 RNU6-177P-201ENST00000411257 104 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.35□□□□□ -2.46
SPTA1P02549 SPINT5P-201ENST00000448174 155 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.35□□□□□ -2.46
SPTA1P02549 MTND1P9-201ENST00000453775 944 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 U8.21-201ENST00000459536 136 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.35□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms