Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AL078596.1-201ENST00000624856 447 ntBASIC1.3□□□□□ -2.2
IFNB1P01574 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
IFNB1P01574 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
IFNB1P01574 ELL2P3-201ENST00000457883 1602 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RNU6-1305P-201ENST00000364353 104 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RNU4-20P-201ENST00000365601 151 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 SNORA67.2-201ENST00000384300 149 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RNA5SP213-201ENST00000391031 106 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MIR1253-201ENST00000408273 105 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MTCO2P16-201ENST00000436962 677 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.29□□□□□ -2.2
IFNB1P01574 MTCO1P19-201ENST00000443487 500 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MTND1P35-201ENST00000526739 508 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
IFNB1P01574 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 AL442163.3-201ENST00000554110 156 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MIR4742-201ENST00000581069 85 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 RMST_3.1-201ENST00000611651 109 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 AC073534.2-201ENST00000620377 381 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 AC068792.1-201ENST00000621354 417 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 snoZ196.1-201ENST00000625269 89 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 MIR3974-201ENST00000637126 96 ntBASIC1.29□□□□□ -2.2
IFNB1P01574 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
IFNB1P01574 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 SNORA4.2-201ENST00000365313 147 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 Y_RNA.381-201ENST00000365666 102 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 SNORA69-201ENST00000383895 132 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.28□□□□□ -2.2
IFNB1P01574 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.28□□□□□ -2.2
IFNB1P01574 RNU7-34P-201ENST00000459394 64 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 AC010424.1-201ENST00000506336 297 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 RNU6-1038P-201ENST00000516516 104 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 AC006001.4-201ENST00000622243 395 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 MIR7843-201ENST00000622274 79 ntBASIC1.28□□□□□ -2.2
IFNB1P01574 Y_RNA.167-201ENST00000363735 109 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 Y_RNA.287-201ENST00000364853 94 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 RNU6-128P-201ENST00000383976 107 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 U8.10-201ENST00000384260 133 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 MIR764-201ENST00000390811 85 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 SNORA17.3-201ENST00000391159 129 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 RPL37P10-201ENST00000412884 288 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 RNU6-221P-201ENST00000459541 99 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.27□□□□□ -2.21
IFNB1P01574 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.27□□□□□ -2.21
IFNB1P01574 RNU6-1198P-201ENST00000516904 67 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.27□□□□□ -2.21
IFNB1P01574 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 AL365434.2-201ENST00000607979 234 ntBASIC1.27□□□□□ -2.21
IFNB1P01574 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.27□□□□□ -2.21
IFNB1P01574 SNORA33-201ENST00000363664 130 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 MIR521-1-201ENST00000384902 87 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RNA5SP323-201ENST00000391094 133 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
IFNB1P01574 RNU6-648P-201ENST00000410190 107 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RNU6-57P-201ENST00000411348 103 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.26□□□□□ -2.21
IFNB1P01574 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.26□□□□□ -2.21
IFNB1P01574 NDUFB4P10-201ENST00000452541 359 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RN7SKP210-201ENST00000459176 261 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 SRRM1P2-201ENST00000464531 1192 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RPL23AP75-201ENST00000491601 451 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 RNU6-835P-201ENST00000516974 104 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.26□□□□□ -2.21
IFNB1P01574 AL158211.1-201ENST00000566763 763 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 AC119751.7-201ENST00000600494 245 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 AC146944.4-201ENST00000602697 718 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 AL133215.3-201ENST00000609801 448 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.26□□□□□ -2.21
IFNB1P01574 FAM157A-202ENST00000615155 405 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 AC009033.1-201ENST00000624279 431 ntBASIC1.26□□□□□ -2.21
IFNB1P01574 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
IFNB1P01574 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
IFNB1P01574 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 RNU6-1042P-201ENST00000384204 107 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
IFNB1P01574 CALM2P3-201ENST00000400429 449 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
IFNB1P01574 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.25□□□□□ -2.21
IFNB1P01574 MTND3P16-201ENST00000452205 344 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 RPL31P58-201ENST00000469001 379 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.25□□□□□ -2.21
IFNB1P01574 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.25□□□□□ -2.21
IFNB1P01574 AC025647.1-201ENST00000517879 253 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.25□□□□□ -2.21
IFNB1P01574 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 SNORD11B-201ENST00000607707 90 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
IFNB1P01574 AL359075.3-201ENST00000613288 217 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms