Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PDGFBP01127 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PDGFBP01127 Y_RNA.112-201ENST00000363250 102 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 Y_RNA.191-201ENST00000363972 113 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 SNORD32B-201ENST00000364460 84 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 Y_RNA.301-201ENST00000364990 103 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 MT-TL1-201ENST00000386347 75 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 RNU6-510P-201ENST00000391239 108 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PDGFBP01127 RNU6-1304P-201ENST00000411374 106 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.84□□□□□ -2.11
PDGFBP01127 AL035666.1-201ENST00000446195 348 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 RNU6-329P-201ENST00000459618 107 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.84□□□□□ -2.11
PDGFBP01127 MTCO2P30-201ENST00000503662 364 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 ACA59.1-201ENST00000515966 143 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 RNU1-54P-201ENST00000517181 120 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.84□□□□□ -2.11
PDGFBP01127 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PDGFBP01127 AC021231.3-201ENST00000558497 370 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.84□□□□□ -2.11
PDGFBP01127 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 AC090517.1-201ENST00000569307 266 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 MIR4273-201ENST00000582824 84 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 AL133215.3-201ENST00000609801 448 ntBASIC1.84□□□□□ -2.11
PDGFBP01127 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
PDGFBP01127 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PDGFBP01127 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 RNU2-41P-201ENST00000410991 178 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.83□□□□□ -2.12
PDGFBP01127 USP9YP30-201ENST00000430729 455 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PDGFBP01127 AC112492.4-201ENST00000456549 352 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.83□□□□□ -2.12
PDGFBP01127 AC005741.1-201ENST00000511094 432 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 RNU6-567P-201ENST00000516746 107 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
PDGFBP01127 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
PDGFBP01127 CPDP1-201ENST00000579660 283 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 MIR4452-201ENST00000583004 71 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 PCGEM1.1-201ENST00000613431 131 ntBASIC1.83□□□□□ -2.12
PDGFBP01127 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDGFBP01127 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PDGFBP01127 U3.9-201ENST00000363823 204 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.82□□□□□ -2.12
PDGFBP01127 RNU6-26P-201ENST00000383985 107 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 RNU6-767P-201ENST00000384132 107 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PDGFBP01127 RNA5SP501-201ENST00000410990 112 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 MTND3P8-201ENST00000412909 339 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AC009310.1-201ENST00000414414 451 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AL139396.1-201ENST00000421137 167 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 RPS3AP52-201ENST00000435639 297 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 FGF7P6-202ENST00000451282 293 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.82□□□□□ -2.12
PDGFBP01127 TOMM22P6-201ENST00000465035 409 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 MTND4P17-201ENST00000470444 350 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.82□□□□□ -2.12
PDGFBP01127 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
PDGFBP01127 SNORA44.1-201ENST00000517031 108 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.82□□□□□ -2.12
PDGFBP01127 CYP4A27P-201ENST00000567218 190 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 AC098657.3-201ENST00000620434 263 ntBASIC1.82□□□□□ -2.12
PDGFBP01127 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PDGFBP01127 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PDGFBP01127 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDGFBP01127 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDGFBP01127 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDGFBP01127 Y_RNA.135-201ENST00000363439 95 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 SNORA18.2-201ENST00000383865 132 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 Y_RNA.390-201ENST00000383932 102 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 MTCYBP2-201ENST00000407745 171 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.81□□□□□ -2.12
PDGFBP01127 Z82188.1-201ENST00000436709 154 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.81□□□□□ -2.12
PDGFBP01127 SNRPEP8-201ENST00000442866 260 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.81□□□□□ -2.12
PDGFBP01127 AC087477.1-201ENST00000465747 340 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 RPL31P58-201ENST00000469001 379 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 AF186996.7-201ENST00000492781 209 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 RNU5F-4P-201ENST00000516581 114 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.81□□□□□ -2.12
PDGFBP01127 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.81□□□□□ -2.12
PDGFBP01127 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.81□□□□□ -2.12
PDGFBP01127 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.81□□□□□ -2.12
PDGFBP01127 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 MIR6734-201ENST00000621166 68 ntBASIC1.81□□□□□ -2.12
PDGFBP01127 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms