Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SCARNA1-201ENST00000517138 166 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AC106038.2-201ENST00000520706 568 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.72□□□□□ -2.29
VAPBO95292 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.72□□□□□ -2.29
VAPBO95292 AP002963.1-201ENST00000530590 184 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VAPBO95292 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.72□□□□□ -2.29
VAPBO95292 MIR5695-201ENST00000579717 85 ntBASIC0.72□□□□□ -2.29
VAPBO95292 SNRPGP20-201ENST00000604477 205 ntBASIC0.72□□□□□ -2.29
VAPBO95292 AL603839.4-201ENST00000624658 1005 ntBASIC0.72□□□□□ -2.29
VAPBO95292 SNORD3E-202ENST00000627253 216 ntBASIC0.72□□□□□ -2.29
VAPBO95292 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
VAPBO95292 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
VAPBO95292 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
VAPBO95292 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
VAPBO95292 RNU6-606P-201ENST00000384721 111 ntBASIC0.71□□□□□ -2.3
VAPBO95292 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AL034345.1-201ENST00000407768 123 ntBASIC0.71□□□□□ -2.3
VAPBO95292 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.71□□□□□ -2.3
VAPBO95292 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC004866.1-201ENST00000411748 78 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
VAPBO95292 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.71□□□□□ -2.3
VAPBO95292 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
VAPBO95292 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
VAPBO95292 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPBO95292 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
VAPBO95292 RNU6-323P-201ENST00000521915 107 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPBO95292 AL137161.1-201ENST00000532231 390 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.71□□□□□ -2.3
VAPBO95292 AC090616.2-202ENST00000584248 222 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
VAPBO95292 AC068790.2-201ENST00000602601 557 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AC011458.1-201ENST00000604034 617 ntBASIC0.71□□□□□ -2.3
VAPBO95292 AL078596.1-201ENST00000624856 447 ntBASIC0.71□□□□□ -2.3
VAPBO95292 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
VAPBO95292 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
VAPBO95292 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
VAPBO95292 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.7□□□□□ -2.3
VAPBO95292 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC133104.1-201ENST00000429100 218 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.7□□□□□ -2.3
VAPBO95292 MTCO3P8-201ENST00000453691 755 ntBASIC0.7□□□□□ -2.3
VAPBO95292 RNU7-138P-201ENST00000459479 64 ntBASIC0.7□□□□□ -2.3
VAPBO95292 U8.21-201ENST00000459536 136 ntBASIC0.7□□□□□ -2.3
VAPBO95292 RPL39P5-202ENST00000512505 151 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
VAPBO95292 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
VAPBO95292 BNIP3P39-201ENST00000601077 554 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AL390123.1-201ENST00000603216 237 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC005014.3-201ENST00000605985 190 ntBASIC0.7□□□□□ -2.3
VAPBO95292 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
VAPBO95292 MIR8054-201ENST00000620877 86 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AL513423.1-201ENST00000621695 132 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC106754.2-201ENST00000623006 233 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC009161.2-201ENST00000624626 138 ntBASIC0.7□□□□□ -2.3
VAPBO95292 AC008163.1-202ENST00000636004 2889 ntBASIC0.69□□□□□ -2.3
VAPBO95292 RNU4-76P-201ENST00000364509 141 ntBASIC0.69□□□□□ -2.3
VAPBO95292 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
VAPBO95292 RNU6-1054P-201ENST00000411293 104 ntBASIC0.69□□□□□ -2.3
VAPBO95292 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC245047.3-201ENST00000429428 127 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
VAPBO95292 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
VAPBO95292 SNORA18.6-201ENST00000516792 115 ntBASIC0.69□□□□□ -2.3
VAPBO95292 MTND2P32-201ENST00000521584 1038 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC007834.2-201ENST00000536310 343 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC087683.2-201ENST00000611384 326 ntBASIC0.69□□□□□ -2.3
VAPBO95292 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
VAPBO95292 AC068787.1-201ENST00000623908 691 ntBASIC0.69□□□□□ -2.3
VAPBO95292 snoZ196.1-201ENST00000625269 89 ntBASIC0.69□□□□□ -2.3
VAPBO95292 U6.108-201ENST00000637764 58 ntBASIC0.69□□□□□ -2.3
VAPBO95292 Y_RNA.124-201ENST00000363339 93 ntBASIC0.68□□□□□ -2.3
VAPBO95292 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
VAPBO95292 RNU6-1240P-201ENST00000365155 104 ntBASIC0.68□□□□□ -2.3
VAPBO95292 SNORA12.1-201ENST00000390873 148 ntBASIC0.68□□□□□ -2.3
VAPBO95292 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC016909.1-201ENST00000415916 166 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.68□□□□□ -2.3
VAPBO95292 HSFY5P-201ENST00000453726 309 ntBASIC0.68□□□□□ -2.3
VAPBO95292 RNU6-947P-201ENST00000516264 106 ntBASIC0.68□□□□□ -2.3
VAPBO95292 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC011604.1-201ENST00000545978 196 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AL121579.1-201ENST00000555129 305 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.68□□□□□ -2.3
VAPBO95292 AL162424.1-201ENST00000602325 221 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC022217.4-201ENST00000604389 163 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC008536.2-201ENST00000607284 349 ntBASIC0.68□□□□□ -2.3
VAPBO95292 AC073349.3-201ENST00000617616 186 ntBASIC0.68□□□□□ -2.3
VAPBO95292 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.68□□□□□ -2.3
VAPBO95292 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.68□□□□□ -2.3
VAPBO95292 RNU6-1286P-201ENST00000383871 107 ntBASIC0.67□□□□□ -2.3
VAPBO95292 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
VAPBO95292 SNORD73A-201ENST00000386062 65 ntBASIC0.67□□□□□ -2.3
VAPBO95292 RNU6-440P-201ENST00000390882 105 ntBASIC0.67□□□□□ -2.3
VAPBO95292 MRPL42P3-201ENST00000401492 326 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms