Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-2O95096 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX2-2O95096 AC018634.1-201ENST00000437554 401 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 MTCO1P44-201ENST00000441935 243 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AC011753.1-201ENST00000451001 220 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 RNU1-131P-201ENST00000458943 161 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 RNU7-87P-201ENST00000459343 62 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AC091179.3-201ENST00000474761 144 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 HMGN2P9-201ENST00000476875 229 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
NKX2-2O95096 RNU6-699P-201ENST00000517081 110 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 RNA5SP402-201ENST00000517148 110 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 MIR2355-201ENST00000517199 87 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX2-2O95096 AC125232.2-201ENST00000592457 143 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
NKX2-2O95096 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-2O95096 AC005296.1-201ENST00000616145 209 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-2O95096 AC091925.1-201ENST00000623204 462 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 SCARNA15.3-201ENST00000626315 122 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 SCARNA4.1-201ENST00000628597 123 ntBASIC2.13□□□□□ -2.07
NKX2-2O95096 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-2O95096 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.12□□□□□ -2.07
NKX2-2O95096 Y_RNA.358-201ENST00000365491 99 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 MRPS18CP6-201ENST00000423587 223 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX2-2O95096 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 U8.22-201ENST00000459141 133 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC010531.2-201ENST00000465012 153 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC105758.1-201ENST00000506038 399 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 RNU6-976P-201ENST00000516086 111 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 RNU2-34P-201ENST00000516534 121 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
NKX2-2O95096 AC093023.1-201ENST00000547375 507 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.12□□□□□ -2.07
NKX2-2O95096 MIR4529-201ENST00000578110 78 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX2-2O95096 MIR4753-201ENST00000585119 83 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC010999.1-201ENST00000611856 324 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 FO624990.1-201ENST00000636373 85 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC068205.3-201ENST00000636385 468 ntBASIC2.12□□□□□ -2.07
NKX2-2O95096 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-2O95096 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-2O95096 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NKX2-2O95096 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NKX2-2O95096 RNA5SP289-201ENST00000362332 137 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 RNU1-58P-201ENST00000362413 163 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 Y_RNA.179-201ENST00000363844 90 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 MIR634-201ENST00000385208 97 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 SNORA69.1-201ENST00000390904 137 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 Y_RNA.592-201ENST00000410274 109 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-2O95096 MTND4P28-201ENST00000426217 387 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AL357134.1-201ENST00000445848 426 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-2O95096 AC114982.1-201ENST00000469402 321 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC027575.1-201ENST00000481064 460 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-2O95096 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.11□□□□□ -2.07
NKX2-2O95096 RNU6-1170P-201ENST00000515974 106 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC144568.1-201ENST00000520139 137 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX2-2O95096 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-2O95096 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
NKX2-2O95096 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-2O95096 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-2O95096 SNORD115-3-201ENST00000363100 82 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 Y_RNA.132-201ENST00000363421 102 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 Y_RNA.197-201ENST00000364004 102 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 SNORD114-6-201ENST00000364393 72 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 Y_RNA.252-201ENST00000364556 101 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 RNU1-138P-201ENST00000384093 164 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 Y_RNA.460-201ENST00000384255 102 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NKX2-2O95096 RNU6-1001P-201ENST00000411265 100 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 AC139712.2-201ENST00000424302 339 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 NDUFB4P10-201ENST00000452541 359 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX2-2O95096 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.1□□□□□ -2.07
NKX2-2O95096 AC067942.3-201ENST00000512025 362 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 Y_RNA.683-201ENST00000516508 93 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX2-2O95096 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX2-2O95096 AL080274.1-201ENST00000605565 220 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 AL160413.1-201ENST00000622780 310 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 AL078596.1-201ENST00000624856 447 ntBASIC2.1□□□□□ -2.07
NKX2-2O95096 MTND5P35-201ENST00000557537 1720 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.09□□□□□ -2.07
NKX2-2O95096 Y_RNA.5-201ENST00000362334 102 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
NKX2-2O95096 RNU4-42P-201ENST00000364738 142 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms