Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BEST1O76090 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
BEST1O76090 MIR764-201ENST00000390811 85 ntBASIC2□□□□□ -2.09
BEST1O76090 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
BEST1O76090 RPL30P16-201ENST00000419341 429 ntBASIC2□□□□□ -2.09
BEST1O76090 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
BEST1O76090 AC243428.1-201ENST00000421099 264 ntBASIC2□□□□□ -2.09
BEST1O76090 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
BEST1O76090 USP9YP30-201ENST00000430729 455 ntBASIC2□□□□□ -2.09
BEST1O76090 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2□□□□□ -2.09
BEST1O76090 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2□□□□□ -2.09
BEST1O76090 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2□□□□□ -2.09
BEST1O76090 FO393415.2-201ENST00000480085 343 ntBASIC2□□□□□ -2.09
BEST1O76090 AC097473.1-201ENST00000508142 408 ntBASIC2□□□□□ -2.09
BEST1O76090 RNU7-175P-201ENST00000515915 61 ntBASIC2□□□□□ -2.09
BEST1O76090 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
BEST1O76090 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2□□□□□ -2.09
BEST1O76090 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2□□□□□ -2.09
BEST1O76090 AC010900.2-201ENST00000604508 210 ntBASIC2□□□□□ -2.09
BEST1O76090 MIR6845-201ENST00000613182 61 ntBASIC2□□□□□ -2.09
BEST1O76090 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2□□□□□ -2.09
BEST1O76090 AC083806.3-201ENST00000614016 455 ntBASIC2□□□□□ -2.09
BEST1O76090 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
BEST1O76090 AC022513.1-201ENST00000624512 117 ntBASIC2□□□□□ -2.09
BEST1O76090 ZNF299P-201ENST00000406845 1804 ntBASIC2□□□□□ -2.09
BEST1O76090 RNU5F-3P-201ENST00000363767 117 ntBASIC1.99□□□□□ -2.09
BEST1O76090 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
BEST1O76090 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
BEST1O76090 RNU6-17P-201ENST00000384245 107 ntBASIC1.99□□□□□ -2.09
BEST1O76090 RNU6-18P-201ENST00000384527 107 ntBASIC1.99□□□□□ -2.09
BEST1O76090 MIR549A-201ENST00000385268 96 ntBASIC1.99□□□□□ -2.09
BEST1O76090 AC004866.1-201ENST00000411748 78 ntBASIC1.99□□□□□ -2.09
BEST1O76090 AC074085.1-201ENST00000413598 418 ntBASIC1.99□□□□□ -2.09
BEST1O76090 NCOR1P3-201ENST00000420479 303 ntBASIC1.99□□□□□ -2.09
BEST1O76090 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
BEST1O76090 ATP5J2P3-201ENST00000451550 258 ntBASIC1.99□□□□□ -2.09
BEST1O76090 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
BEST1O76090 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
BEST1O76090 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
BEST1O76090 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.99□□□□□ -2.09
BEST1O76090 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.99□□□□□ -2.09
BEST1O76090 AC084782.3-201ENST00000612282 578 ntBASIC1.99□□□□□ -2.09
BEST1O76090 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
BEST1O76090 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
BEST1O76090 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
BEST1O76090 AC245060.5-201ENST00000610778 3293 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-595P-201ENST00000363944 107 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-975P-201ENST00000384296 105 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-1235P-201ENST00000384559 107 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-541P-201ENST00000384709 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
BEST1O76090 MIR504-201ENST00000385065 83 ntBASIC1.98□□□□□ -2.09
BEST1O76090 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
BEST1O76090 MIR548K-201ENST00000408406 116 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNA5SP100-201ENST00000410903 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 RNA5SP59-201ENST00000410922 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
BEST1O76090 CYCSP49-201ENST00000420810 319 ntBASIC1.98□□□□□ -2.09
BEST1O76090 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-498P-201ENST00000459468 107 ntBASIC1.98□□□□□ -2.09
BEST1O76090 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.98□□□□□ -2.09
BEST1O76090 RNU6-295P-201ENST00000516901 104 ntBASIC1.98□□□□□ -2.09
BEST1O76090 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.98□□□□□ -2.09
BEST1O76090 AL590705.4-201ENST00000532209 134 ntBASIC1.98□□□□□ -2.09
BEST1O76090 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
BEST1O76090 AC104581.2-201ENST00000572227 430 ntBASIC1.98□□□□□ -2.09
BEST1O76090 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.98□□□□□ -2.09
BEST1O76090 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
BEST1O76090 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.98□□□□□ -2.09
BEST1O76090 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
BEST1O76090 RNU1-62P-201ENST00000362599 164 ntBASIC1.97□□□□□ -2.09
BEST1O76090 RNU6-1305P-201ENST00000364353 104 ntBASIC1.97□□□□□ -2.09
BEST1O76090 Y_RNA.248-201ENST00000364501 109 ntBASIC1.97□□□□□ -2.09
BEST1O76090 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
BEST1O76090 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
BEST1O76090 Y_RNA.533-201ENST00000384596 114 ntBASIC1.97□□□□□ -2.09
BEST1O76090 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.97□□□□□ -2.09
BEST1O76090 HMGN2P9-201ENST00000476875 229 ntBASIC1.97□□□□□ -2.09
BEST1O76090 RPL30P10-201ENST00000488148 337 ntBASIC1.97□□□□□ -2.09
BEST1O76090 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.97□□□□□ -2.09
BEST1O76090 AC134698.4-201ENST00000523451 826 ntBASIC1.97□□□□□ -2.09
BEST1O76090 AC027288.2-201ENST00000553028 243 ntBASIC1.97□□□□□ -2.09
BEST1O76090 AC008873.1-201ENST00000625051 138 ntBASIC1.97□□□□□ -2.09
BEST1O76090 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
BEST1O76090 RNU6-280P-201ENST00000364145 104 ntBASIC1.96□□□□□ -2.1
BEST1O76090 RNU6-767P-201ENST00000384132 107 ntBASIC1.96□□□□□ -2.1
BEST1O76090 RNU6-842P-201ENST00000384269 107 ntBASIC1.96□□□□□ -2.1
BEST1O76090 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
BEST1O76090 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
BEST1O76090 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.96□□□□□ -2.1
BEST1O76090 USMG5P1-201ENST00000425964 177 ntBASIC1.96□□□□□ -2.1
BEST1O76090 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.96□□□□□ -2.1
BEST1O76090 AL591806.2-201ENST00000433122 173 ntBASIC1.96□□□□□ -2.1
BEST1O76090 AC107399.1-201ENST00000451226 265 ntBASIC1.96□□□□□ -2.1
BEST1O76090 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
BEST1O76090 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
BEST1O76090 RNU6-1016P-201ENST00000516689 94 ntBASIC1.96□□□□□ -2.1
BEST1O76090 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms