Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RNU1-41P-201ENST00000516161 162 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 RNU1-48P-201ENST00000516400 162 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 RNU6-344P-201ENST00000516635 111 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 RNU6-1314P-201ENST00000517139 104 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 MTND4LP26-201ENST00000518144 282 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.86□□□□□ -2.11
PLOD3O60568 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.86□□□□□ -2.11
PLOD3O60568 AC084364.2-201ENST00000546924 395 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.86□□□□□ -2.11
PLOD3O60568 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 MIR3942-201ENST00000585264 109 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.86□□□□□ -2.11
PLOD3O60568 U2.15-201ENST00000611544 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 AC084782.3-201ENST00000612282 578 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.16-201ENST00000613119 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.12-201ENST00000613778 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.20-201ENST00000613956 192 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.9-201ENST00000615427 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U6atac.1-201ENST00000616025 117 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.11-201ENST00000616345 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.2-201ENST00000616535 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.3-201ENST00000617785 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.19-201ENST00000618602 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 RNU2-1-201ENST00000618664 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.6-201ENST00000619225 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.5-201ENST00000619465 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 U2.10-201ENST00000620268 191 ntBASIC1.86□□□□□ -2.11
PLOD3O60568 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
PLOD3O60568 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
PLOD3O60568 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PLOD3O60568 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PLOD3O60568 Y_RNA.135-201ENST00000363439 95 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 SNORD115-32-201ENST00000364079 82 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 SNORA72.2-201ENST00000365028 127 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 AL513185.2-201ENST00000425543 193 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PLOD3O60568 RNU7-57P-201ENST00000459540 60 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
PLOD3O60568 MIR4273-201ENST00000582824 84 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.85□□□□□ -2.11
PLOD3O60568 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.85□□□□□ -2.11
PLOD3O60568 AC002553.4-201ENST00000616896 331 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 AC126177.8-201ENST00000618339 1015 ntBASIC1.85□□□□□ -2.11
PLOD3O60568 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PLOD3O60568 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PLOD3O60568 Y_RNA.67-201ENST00000362870 100 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 Y_RNA.86-201ENST00000363020 111 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 Y_RNA.157-201ENST00000363638 102 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 Y_RNA.505-201ENST00000384489 102 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 MIR515-2-201ENST00000384883 83 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 MIR515-1-201ENST00000384884 83 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.84□□□□□ -2.11
PLOD3O60568 AC007098.1-201ENST00000420122 367 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.84□□□□□ -2.11
PLOD3O60568 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
PLOD3O60568 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.84□□□□□ -2.11
PLOD3O60568 AC069439.1-201ENST00000494739 167 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
PLOD3O60568 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
PLOD3O60568 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 SNORD11B-201ENST00000607707 90 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 DUXAP9-208ENST00000622815 614 ntBASIC1.84□□□□□ -2.11
PLOD3O60568 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PLOD3O60568 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PLOD3O60568 U8.2-201ENST00000363156 134 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 SNORD115-8-201ENST00000363856 82 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 RNU4-42P-201ENST00000364738 142 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 SNORD115-38-201ENST00000365037 82 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 SNORA70B-201ENST00000384210 135 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PLOD3O60568 MIR1261-201ENST00000408659 82 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC004866.1-201ENST00000411748 78 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
PLOD3O60568 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC245047.4-201ENST00000433189 144 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
PLOD3O60568 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.83□□□□□ -2.12
PLOD3O60568 RPL23AP63-201ENST00000498752 471 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
PLOD3O60568 RNU1-117P-201ENST00000517041 158 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
PLOD3O60568 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.83□□□□□ -2.12
PLOD3O60568 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.83□□□□□ -2.12
PLOD3O60568 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC092794.1-201ENST00000612734 582 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 AC068205.3-201ENST00000636385 468 ntBASIC1.83□□□□□ -2.12
PLOD3O60568 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.83□□□□□ -2.12
PLOD3O60568 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PLOD3O60568 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PLOD3O60568 RNU6-137P-201ENST00000363680 108 ntBASIC1.82□□□□□ -2.12
PLOD3O60568 Y_RNA.319-201ENST00000365138 92 ntBASIC1.82□□□□□ -2.12
PLOD3O60568 RNU6-831P-201ENST00000384548 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms