Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC011458.1-201ENST00000604034 617 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 AP000907.4-201ENST00000604143 237 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 SNRPGP20-201ENST00000604477 205 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.77□□□□□ -2.29
KDELR3O43731 AL603839.4-201ENST00000624658 1005 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.77□□□□□ -2.29
KDELR3O43731 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
KDELR3O43731 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
KDELR3O43731 Y_RNA.224-201ENST00000364308 111 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 RNU6-1305P-201ENST00000364353 104 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 Y_RNA.287-201ENST00000364853 94 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 RNA5SP494-201ENST00000410653 129 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 AC010154.1-201ENST00000425857 269 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.76□□□□□ -2.29
KDELR3O43731 RNU7-138P-201ENST00000459479 64 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 MRPS36P3-201ENST00000519284 130 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 AP002963.1-201ENST00000530590 184 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 AC090616.2-202ENST00000584248 222 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 AC068790.2-201ENST00000602601 557 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 AL359075.3-201ENST00000613288 217 ntBASIC0.76□□□□□ -2.29
KDELR3O43731 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.76□□□□□ -2.29
KDELR3O43731 RNA5SP467-201ENST00000391274 118 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AL034345.1-201ENST00000407768 123 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 MIR548J-201ENST00000408833 112 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.75□□□□□ -2.29
KDELR3O43731 AC133104.1-201ENST00000429100 218 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 HSFY5P-201ENST00000453726 309 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.75□□□□□ -2.29
KDELR3O43731 SNRPGP9-201ENST00000456025 225 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 MTND2P39-201ENST00000457230 764 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 RNU6-1037P-201ENST00000459571 107 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AC092991.1-201ENST00000477176 376 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AC105758.1-201ENST00000506038 399 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 RNU6-1069P-201ENST00000516612 133 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AL137161.1-201ENST00000532231 390 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 TPRKBP2-201ENST00000565969 475 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AC005014.3-201ENST00000605985 190 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AC097065.2-201ENST00000608159 533 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AP001596.2-201ENST00000608410 312 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 GHRLOS.1-201ENST00000610995 70 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.75□□□□□ -2.29
KDELR3O43731 AL513423.1-201ENST00000621695 132 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 AL078596.1-201ENST00000624856 447 ntBASIC0.75□□□□□ -2.29
KDELR3O43731 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
KDELR3O43731 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.74□□□□□ -2.29
KDELR3O43731 U8.21-201ENST00000459536 136 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 RNU7-57P-201ENST00000459540 60 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.74□□□□□ -2.29
KDELR3O43731 AC011604.1-201ENST00000545978 196 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.74□□□□□ -2.29
KDELR3O43731 BNIP3P39-201ENST00000601077 554 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AC068787.1-201ENST00000623908 691 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 AC009161.2-201ENST00000624626 138 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 snoZ196.1-201ENST00000625269 89 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 SNORD3E-202ENST00000627253 216 ntBASIC0.74□□□□□ -2.29
KDELR3O43731 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.74□□□□□ -2.29
KDELR3O43731 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KDELR3O43731 RNU6-505P-201ENST00000384427 107 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 Y_RNA.560-201ENST00000384689 102 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
KDELR3O43731 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 AC245047.3-201ENST00000429428 127 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.73□□□□□ -2.29
KDELR3O43731 RNU6-922P-201ENST00000516753 99 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 MTND2P32-201ENST00000521584 1038 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.73□□□□□ -2.29
KDELR3O43731 AL137100.2-201ENST00000555786 315 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.73□□□□□ -2.29
KDELR3O43731 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
KDELR3O43731 AL162424.1-201ENST00000602325 221 ntBASIC0.73□□□□□ -2.29
KDELR3O43731 RNU4-76P-201ENST00000364509 141 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 RNU6-1240P-201ENST00000365155 104 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.72□□□□□ -2.29
KDELR3O43731 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 MTCO3P8-201ENST00000453691 755 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC048334.1-201ENST00000477975 159 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.72□□□□□ -2.29
KDELR3O43731 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 SNORA18.6-201ENST00000516792 115 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 RNU6-323P-201ENST00000521915 107 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC007834.2-201ENST00000536310 343 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 AC025449.1-201ENST00000603896 529 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 MIR8054-201ENST00000620877 86 ntBASIC0.72□□□□□ -2.29
KDELR3O43731 RNU5B-2P-201ENST00000363036 113 ntBASIC0.71□□□□□ -2.3
KDELR3O43731 RNU6-1286P-201ENST00000383871 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms