Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL049545.1-201ENST00000401856 572 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 AC074290.1-201ENST00000448883 135 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 MTCO3P8-201ENST00000453691 755 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 HMGN1P12-201ENST00000499125 195 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 RNU6-1069P-201ENST00000516612 133 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.08□□□□□ -2.24
CLOCKO15516 MIR4742-201ENST00000581069 85 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 MZT1P2-201ENST00000604387 248 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 AC040896.1-201ENST00000613819 479 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 AC009509.4-201ENST00000619202 509 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 MTND4P5-201ENST00000435821 1374 ntBASIC1.08□□□□□ -2.24
CLOCKO15516 Y_RNA.123-201ENST00000363338 102 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 SNORA33-201ENST00000363664 130 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 RNU6-1317P-201ENST00000364582 104 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 RNU6-968P-201ENST00000384076 107 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 MIR586-201ENST00000385035 97 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 MIR549A-201ENST00000385268 96 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CLOCKO15516 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLOCKO15516 MIR1276-201ENST00000408707 83 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
CLOCKO15516 CDK8P2-201ENST00000415020 547 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.07□□□□□ -2.24
CLOCKO15516 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.07□□□□□ -2.24
CLOCKO15516 COX6CP14-201ENST00000469580 174 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.07□□□□□ -2.24
CLOCKO15516 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.07□□□□□ -2.24
CLOCKO15516 AC024995.1-201ENST00000523014 93 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 AC104576.1-201ENST00000524225 88 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 CENPUP1-201ENST00000526649 1202 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 MRPS36P4-201ENST00000534436 298 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 Z99497.2-201ENST00000603634 310 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 SNRPGP20-201ENST00000604477 205 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 AC073114.1-201ENST00000612027 490 ntBASIC1.07□□□□□ -2.24
CLOCKO15516 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLOCKO15516 RNU6-1123P-201ENST00000362347 106 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 RNU6-1305P-201ENST00000364353 104 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 RNU6-417P-201ENST00000384712 107 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC004866.1-201ENST00000411748 78 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.06□□□□□ -2.24
CLOCKO15516 AL353193.1-201ENST00000421444 268 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AL606489.2-201ENST00000433886 234 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.06□□□□□ -2.24
CLOCKO15516 Y_RNA.717-201ENST00000517106 92 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
CLOCKO15516 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
CLOCKO15516 AC025423.5-201ENST00000550230 219 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC080078.3-201ENST00000605407 463 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC007684.1-201ENST00000609671 477 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.06□□□□□ -2.24
CLOCKO15516 AC006001.4-201ENST00000622243 395 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 FER-210ENST00000628534 558 ntTSL 5 BASIC1.06□□□□□ -2.24
CLOCKO15516 AC099654.5-201ENST00000636479 350 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 AC027514.1-201ENST00000588561 1603 ntBASIC1.06□□□□□ -2.24
CLOCKO15516 Y_RNA.191-201ENST00000363972 113 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 RNA5SP259-201ENST00000365541 109 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CLOCKO15516 MIR1253-201ENST00000408273 105 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 RNU7-57P-201ENST00000459540 60 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 HMGB1P29-201ENST00000505659 499 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 Y_RNA.695-201ENST00000516715 107 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CLOCKO15516 MIR3664-201ENST00000579074 99 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 AC073648.5-201ENST00000603502 305 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 AC092747.3-201ENST00000603769 301 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 AL357078.3-201ENST00000607528 618 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 RMST_3.1-201ENST00000611651 109 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 MIR6504-201ENST00000613520 61 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 AC139792.3-201ENST00000623525 224 ntBASIC1.05□□□□□ -2.24
CLOCKO15516 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLOCKO15516 Y_RNA.118-201ENST00000363300 101 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 Y_RNA.381-201ENST00000365666 102 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 RNU6-950P-201ENST00000384651 107 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 RPL21P1-201ENST00000399532 476 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 MIR320B2-201ENST00000408479 138 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.04□□□□□ -2.24
CLOCKO15516 SNORA40.12-201ENST00000516329 111 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 RNU6-1038P-201ENST00000516516 104 ntBASIC1.04□□□□□ -2.24
CLOCKO15516 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.04□□□□□ -2.24
CLOCKO15516 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.04□□□□□ -2.24
CLOCKO15516 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.04□□□□□ -2.24
CLOCKO15516 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.04□□□□□ -2.24
CLOCKO15516 AL157687.1-201ENST00000554853 619 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms