Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SNORA31.10-201ENST00000516482 106 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 RNU6-759P-201ENST00000516740 103 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.67□□□□□ -2.3
UBFD1O14562 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.67□□□□□ -2.3
UBFD1O14562 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.67□□□□□ -2.3
UBFD1O14562 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 BNIP3P39-201ENST00000601077 554 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC006566.1-201ENST00000608943 513 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC021506.2-201ENST00000612354 169 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
UBFD1O14562 AC009541.1-201ENST00000438279 2662 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 snoU2-30.2-201ENST00000362805 70 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
UBFD1O14562 MIR300-201ENST00000401138 83 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 CYCSP46-201ENST00000423569 204 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.66□□□□□ -2.3
UBFD1O14562 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.66□□□□□ -2.3
UBFD1O14562 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 SCARNA1-201ENST00000517138 166 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.66□□□□□ -2.3
UBFD1O14562 AC106038.2-201ENST00000520706 568 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 MIR3682-201ENST00000581338 84 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AC090616.2-202ENST00000584248 222 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 MIR4753-201ENST00000585119 83 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
UBFD1O14562 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.66□□□□□ -2.3
UBFD1O14562 AC008163.1-202ENST00000636004 2889 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 SNORA29-201ENST00000384183 140 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6-975P-201ENST00000384296 105 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6-456P-201ENST00000384493 107 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6-1235P-201ENST00000384559 107 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 MIR625-201ENST00000385047 85 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU2-9P-201ENST00000410194 145 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC114482.1-201ENST00000418010 247 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC013410.2-201ENST00000422627 201 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.65□□□□□ -2.31
UBFD1O14562 CETN4P-201ENST00000432407 469 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.65□□□□□ -2.31
UBFD1O14562 MTCO3P8-201ENST00000453691 755 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6-498P-201ENST00000459468 107 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.65□□□□□ -2.31
UBFD1O14562 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.65□□□□□ -2.31
UBFD1O14562 RNU6-948P-201ENST00000516374 107 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC087854.1-201ENST00000519706 414 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.65□□□□□ -2.31
UBFD1O14562 MIR5695-201ENST00000579717 85 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 MIR5006-201ENST00000583027 110 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 Z99497.2-201ENST00000603634 310 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC011458.1-201ENST00000604034 617 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.65□□□□□ -2.31
UBFD1O14562 AP001506.1-201ENST00000615444 211 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AC005562.2-201ENST00000618264 111 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 AL136221.1-201ENST00000621449 509 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.65□□□□□ -2.31
UBFD1O14562 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.65□□□□□ -2.31
UBFD1O14562 U6.108-201ENST00000637764 58 ntBASIC0.65□□□□□ -2.31
UBFD1O14562 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.64□□□□□ -2.31
UBFD1O14562 RNU6-181P-201ENST00000363225 107 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 SNORD114-23-201ENST00000363536 72 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 Y_RNA.399-201ENST00000383955 105 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 RNU6-606P-201ENST00000384721 111 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 SNORA12.1-201ENST00000390873 148 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AL031577.2-201ENST00000404133 280 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.64□□□□□ -2.31
UBFD1O14562 AC016909.1-201ENST00000415916 166 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.64□□□□□ -2.31
UBFD1O14562 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.64□□□□□ -2.31
UBFD1O14562 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AC005002.2-201ENST00000438228 269 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.64□□□□□ -2.31
UBFD1O14562 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.64□□□□□ -2.31
UBFD1O14562 AL033528.1-201ENST00000453780 140 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 RNU7-167P-201ENST00000459160 62 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 RPS29P27-201ENST00000463711 170 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.64□□□□□ -2.31
UBFD1O14562 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.64□□□□□ -2.31
UBFD1O14562 AC105417.1-201ENST00000514691 285 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 SNORA18.6-201ENST00000516792 115 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 RNU6-445P-201ENST00000516949 107 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.64□□□□□ -2.31
UBFD1O14562 AC025449.1-201ENST00000603896 529 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.64□□□□□ -2.31
UBFD1O14562 AC008133.2-201ENST00000624540 351 ntBASIC0.64□□□□□ -2.31
UBFD1O14562 RNU6-1123P-201ENST00000362347 106 ntBASIC0.63□□□□□ -2.31
UBFD1O14562 RNU5B-2P-201ENST00000363036 113 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms