Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CBX3P1-201ENST00000325243 554 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.6□□□□□ -2.15
PDLIM1O00151 RNU6-510P-201ENST00000391239 108 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC079354.2-201ENST00000453523 154 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.6□□□□□ -2.15
PDLIM1O00151 RNVU1-2-201ENST00000516326 135 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 RRN3P3-201ENST00000549207 578 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC018638.8-201ENST00000588755 281 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 7SK.7-201ENST00000603504 247 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 BNIP3P10-201ENST00000605360 577 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC083806.3-201ENST00000614016 455 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AC009248.2-201ENST00000619826 254 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AL359697.1-201ENST00000624879 587 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 SCARNA4-201ENST00000629045 128 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 ZNF204P-201ENST00000416749 2397 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 AL159152.1-201ENST00000635019 2587 ntBASIC1.6□□□□□ -2.15
PDLIM1O00151 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PDLIM1O00151 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PDLIM1O00151 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR340-201ENST00000362125 95 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 RNU6-418P-201ENST00000384035 107 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR487A-201ENST00000385009 80 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 SNORA48.1-201ENST00000390879 135 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR1283-1-201ENST00000408494 87 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.59□□□□□ -2.15
PDLIM1O00151 AL139396.1-201ENST00000421137 167 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 AL358453.1-201ENST00000422522 250 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
PDLIM1O00151 Z82188.1-201ENST00000436709 154 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MTATP6P13-201ENST00000438531 667 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.59□□□□□ -2.15
PDLIM1O00151 AC007215.1-201ENST00000464893 276 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 AC097473.1-201ENST00000508142 408 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 SUMO2P18-201ENST00000518873 252 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
PDLIM1O00151 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.59□□□□□ -2.15
PDLIM1O00151 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.59□□□□□ -2.15
PDLIM1O00151 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.59□□□□□ -2.15
PDLIM1O00151 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR4790-201ENST00000577799 79 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
PDLIM1O00151 MTND4P5-201ENST00000435821 1374 ntBASIC1.59□□□□□ -2.16
PDLIM1O00151 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PDLIM1O00151 Y_RNA.301-201ENST00000364990 103 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 RNU6-541P-201ENST00000384709 110 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 NCOR1P3-201ENST00000420479 303 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.58□□□□□ -2.16
PDLIM1O00151 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 MTCO1P44-201ENST00000441935 243 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 snoU13.23-201ENST00000458863 104 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 snoU13.30-201ENST00000458951 104 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AC010531.2-201ENST00000465012 153 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AC069439.1-201ENST00000494739 167 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 Y_RNA.682-201ENST00000516457 100 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 RNU6-1198P-201ENST00000516904 67 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.58□□□□□ -2.16
PDLIM1O00151 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 AC011494.1-201ENST00000596454 237 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 uc_338.5-201ENST00000611839 155 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 U6atac.1-201ENST00000616025 117 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 MIR7843-201ENST00000622274 79 ntBASIC1.58□□□□□ -2.16
PDLIM1O00151 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.58□□□□□ -2.16
PDLIM1O00151 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.58□□□□□ -2.16
PDLIM1O00151 BX322639.1-202ENST00000423987 2213 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 RNU6-1305P-201ENST00000364353 104 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 Y_RNA.619-201ENST00000410951 90 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.57□□□□□ -2.16
PDLIM1O00151 MTCO3P46-201ENST00000425787 232 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 HMGB1P18-201ENST00000438801 619 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC009237.7-201ENST00000447357 229 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC112492.4-201ENST00000456549 352 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 RNU6-329P-201ENST00000459618 107 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC114982.1-201ENST00000469402 321 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.57□□□□□ -2.16
PDLIM1O00151 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.57□□□□□ -2.16
PDLIM1O00151 RNA5SP54-201ENST00000516951 92 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
PDLIM1O00151 MTND4LP26-201ENST00000518144 282 ntBASIC1.57□□□□□ -2.16
PDLIM1O00151 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.57□□□□□ -2.16
PDLIM1O00151 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms