Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.72-201ENST00000362894 103 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-1059P-201ENST00000363752 98 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.184-201ENST00000363884 108 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-546P-201ENST00000383991 107 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-611P-201ENST00000384276 104 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR517A-201ENST00000385001 87 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR487A-201ENST00000385009 80 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-174P-201ENST00000410406 106 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 snoU13.6-201ENST00000458785 104 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 U8.21-201ENST00000459536 136 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR449C-201ENST00000516047 92 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.682-201ENST00000516457 100 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORA20.3-201ENST00000516880 132 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 CYP4A27P-201ENST00000567218 190 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR5696-201ENST00000578474 85 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC243960.4-201ENST00000600532 288 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC022306.2-201ENST00000617563 647 ntBASIC1.46□□□□□ -2.18
TMX2-CTNND1H3BSU7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 ZNF702P-202ENST00000434269 1966 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-596P-201ENST00000365395 98 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-306P-201ENST00000384617 107 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR521-1-201ENST00000384902 87 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORA12.2-201ENST00000391040 156 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU2-41P-201ENST00000410991 178 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC009161.1-201ENST00000417306 376 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 USP9YP30-201ENST00000430729 455 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RPS3AP52-201ENST00000435639 297 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 Z82188.1-201ENST00000436709 154 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 PCMTD1P1-201ENST00000455560 355 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORD5.1-201ENST00000458800 75 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC132942.1-201ENST00000486753 483 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RPL23AP75-201ENST00000491601 451 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 ATP5EP1-201ENST00000510257 156 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC046134.1-201ENST00000514454 666 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNA5SP137-201ENST00000516833 135 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-273P-201ENST00000516937 96 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 EIF4A1P12-201ENST00000551910 141 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR3923-201ENST00000579521 83 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TMX2-CTNND1H3BSU7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.160-201ENST00000363677 92 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.166-201ENST00000363730 102 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-1106P-201ENST00000390845 107 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-510P-201ENST00000391239 108 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 HMGN2P39-201ENST00000398005 273 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU4-14P-201ENST00000410858 122 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 RPS26P42-201ENST00000413485 326 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 TOMM22P6-201ENST00000465035 409 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 HMGN1P12-201ENST00000499125 195 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC116353.2-201ENST00000505332 712 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC026782.1-201ENST00000512952 449 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.691-201ENST00000516611 103 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU7-30P-201ENST00000516835 62 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC011712.1-201ENST00000588959 234 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC124303.1-201ENST00000605703 360 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL773524.1-201ENST00000614065 229 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC099654.14-201ENST00000638599 341 ntBASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.44□□□□□ -2.18
TMX2-CTNND1H3BSU7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 CBX3P1-201ENST00000325243 554 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORD81.2-201ENST00000365153 76 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms