Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-3A6NJ46 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 RNU6-873P-201ENST00000363833 107 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 RNU6-418P-201ENST00000384035 107 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 NCOR1P3-201ENST00000420479 303 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC092423.1-201ENST00000430165 186 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MTATP6P23-201ENST00000440153 476 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 RN7SKP210-201ENST00000459176 261 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AP000870.1-201ENST00000472927 406 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 SNORA25.14-201ENST00000516481 132 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.706-201ENST00000516933 99 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC093027.1-201ENST00000546698 429 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC027288.2-201ENST00000553028 243 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AL355375.2-201ENST00000574825 175 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR5695-201ENST00000579717 85 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 SNRPGP20-201ENST00000604477 205 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AL132765.2-201ENST00000610812 351 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR1244-1-201ENST00000612829 85 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR1244-3-201ENST00000635744 85 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR1244-2-201ENST00000636449 85 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 MIR1244-4-202ENST00000636813 85 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 AC112487.2-201ENST00000637950 304 ntBASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
NKX6-3A6NJ46 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.67-201ENST00000362870 100 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.99-201ENST00000363138 105 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.106-201ENST00000363189 100 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6-23P-201ENST00000363283 107 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6-1188P-201ENST00000363795 107 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 SNORD115-32-201ENST00000364079 82 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6-1305P-201ENST00000364353 104 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.259-201ENST00000364619 101 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 SNORD31B-201ENST00000364977 69 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.384-201ENST00000383909 102 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6-17P-201ENST00000384245 107 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6-18P-201ENST00000384527 107 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 MTND3P23-201ENST00000431980 347 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AC016717.1-201ENST00000448918 286 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 MTCO3P10-201ENST00000455912 772 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AC104435.1-201ENST00000483483 166 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 RRN3P3-201ENST00000549207 578 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AC026470.2-201ENST00000561492 181 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 MIR5690-201ENST00000583739 73 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 AL359314.1-201ENST00000616913 261 ntBASIC1.8□□□□□ -2.12
NKX6-3A6NJ46 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.58-201ENST00000362807 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.132-201ENST00000363421 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.154-201ENST00000363624 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNU6-99P-201ENST00000364721 107 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNY3P1-201ENST00000365085 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNA5SP138-201ENST00000365098 114 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.332-201ENST00000365271 113 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNY3-201ENST00000365484 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNU6-890P-201ENST00000384121 107 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.490-201ENST00000384413 102 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNU6-1297P-201ENST00000384415 104 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNU6-700P-201ENST00000391043 107 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 MTCYBP4-201ENST00000401524 249 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 MIR320B2-201ENST00000408479 138 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 DPH3P2-201ENST00000422618 250 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AC007215.1-201ENST00000464893 276 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RPS29P21-201ENST00000496272 170 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AC097473.1-201ENST00000508142 408 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AC134698.4-201ENST00000523451 826 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 MIR4648-201ENST00000580107 72 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 MIR4753-201ENST00000585119 83 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 AC100812.1-201ENST00000607622 580 ntBASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NKX6-3A6NJ46 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 BX322639.1-202ENST00000423987 2213 ntBASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 MTND5P16-201ENST00000460269 1703 ntBASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 RNU6-874P-201ENST00000362390 105 ntBASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
NKX6-3A6NJ46 Y_RNA.387-201ENST00000383918 102 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms