Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TMF1P1-201ENST00000576058 373 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 MIR4804-201ENST00000581683 73 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AC064872.1-201ENST00000604823 1072 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 AC090186.1-201ENST00000605991 572 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 MIR7107-201ENST00000611489 80 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 PART1_2.1-201ENST00000612397 250 ntBASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.43□□□□□ -2.64
LINC01549A6NIU2 SNORA72.1-201ENST00000363485 129 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 RNU6-432P-201ENST00000384196 109 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 COX7BP2-201ENST00000437976 242 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 OFD1P3Y-201ENST00000453312 783 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 AC010468.3-201ENST00000508225 458 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 AC023824.3-201ENST00000569003 562 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 AL590491.3-201ENST00000610731 82 ntBASIC-1.44□□□□□ -2.64
LINC01549A6NIU2 RNU6-28P-201ENST00000362378 107 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 RNU6-811P-201ENST00000384069 107 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 USP9YP11-201ENST00000427537 717 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 AC107297.1-201ENST00000459991 176 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 RNA5SP135-201ENST00000517019 125 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 MIR3152-201ENST00000579801 74 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 AL442067.1-201ENST00000613261 223 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 AL359075.3-201ENST00000613288 217 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 MIR6514-201ENST00000622549 70 ntBASIC-1.45□□□□□ -2.64
LINC01549A6NIU2 RNU6-424P-201ENST00000384367 105 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 MIR196A1-201ENST00000388006 70 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AL365338.1-201ENST00000422282 858 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 MTCO1P5-201ENST00000433573 344 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 SPINT5P-201ENST00000448174 155 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 RNU6-885P-201ENST00000516607 104 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AC115990.1-201ENST00000526957 301 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AC133485.4-201ENST00000561835 220 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 AC109446.1-201ENST00000566172 220 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 BNIP3P9-201ENST00000603714 553 ntBASIC-1.46□□□□□ -2.64
LINC01549A6NIU2 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 ERHP2-201ENST00000402323 299 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 MIR548L-201ENST00000408303 86 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 CDK8P2-201ENST00000415020 547 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 MTCO2P5-201ENST00000422621 426 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 BTF3P11-201ENST00000426582 477 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 AC093850.1-201ENST00000454121 251 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 AC007215.1-201ENST00000464893 276 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 AC022447.4-201ENST00000504053 364 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 AL354696.1-201ENST00000614652 497 ntBASIC-1.47□□□□□ -2.64
LINC01549A6NIU2 RNU6-72P-201ENST00000384285 79 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 RNU6-417P-201ENST00000384712 107 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 MIR563-201ENST00000385080 79 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 RNU6-613P-201ENST00000410412 108 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AL392103.1-201ENST00000447000 198 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AC109327.2-201ENST00000448339 378 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AC113347.3-201ENST00000509113 148 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 RNU6-63P-201ENST00000516690 95 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 RNU6-714P-201ENST00000516963 103 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AC090897.1-201ENST00000580909 226 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 MIR4636-201ENST00000582271 80 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 AC125232.2-201ENST00000592457 143 ntBASIC-1.48□□□□□ -2.65
LINC01549A6NIU2 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 SNORD32A-201ENST00000364805 84 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 MIR301A-201ENST00000385261 86 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 MTCYBP2-201ENST00000407745 171 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 MLLT10P1-201ENST00000418346 262 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 RPS24P1-201ENST00000438550 371 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 MTCO3P27-201ENST00000514397 196 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 RNU1-142P-201ENST00000516682 145 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AC091946.2-201ENST00000606105 291 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 AL121992.2-201ENST00000606262 256 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 SNORA28-201ENST00000606769 126 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 U6.108-201ENST00000637764 58 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 MTND4P12-201ENST00000498999 1377 ntBASIC-1.49□□□□□ -2.65
LINC01549A6NIU2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 MIR625-201ENST00000385047 85 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 RPL39P36-201ENST00000490784 156 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 RPS23P5-201ENST00000495419 428 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 MTND3P5-201ENST00000512798 333 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 SNORA18.7-201ENST00000516910 131 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms