Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AP002004.2-201ENST00000531656 154 ntBASIC-1.14□□□□□ -2.59
LINC01546A6NGU7 AL390208.1-201ENST00000605885 644 ntBASIC-1.14□□□□□ -2.59
LINC01546A6NGU7 AL139286.2-201ENST00000606838 396 ntBASIC-1.14□□□□□ -2.59
LINC01546A6NGU7 AC006441.5-201ENST00000612680 209 ntBASIC-1.14□□□□□ -2.59
LINC01546A6NGU7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.14□□□□□ -2.59
LINC01546A6NGU7 RNY4P24-201ENST00000362735 96 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 Y_RNA.324-201ENST00000365165 102 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 MIR301A-201ENST00000385261 86 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 RNA5SP467-201ENST00000391274 118 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 TIMM9P3-201ENST00000428659 274 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AL133396.1-201ENST00000432048 687 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AC109446.1-201ENST00000566172 220 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 MIR4306-201ENST00000583390 91 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AC121334.2-201ENST00000605387 271 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AC134878.1-201ENST00000619901 243 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 AC092104.1-201ENST00000497346 1441 ntBASIC-1.15□□□□□ -2.59
LINC01546A6NGU7 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 RNU6-116P-201ENST00000384042 109 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 MTCO3P41-201ENST00000414801 328 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 snoU13.14-201ENST00000459372 104 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AP000870.1-201ENST00000472927 406 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 RNU6-528P-201ENST00000516926 100 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AC090897.1-201ENST00000580909 226 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 VN1R83P-201ENST00000595685 445 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AC008608.1-201ENST00000603910 127 ntBASIC-1.16□□□□□ -2.6
LINC01546A6NGU7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 CALM2P4-201ENST00000430810 426 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 MTCO2P7-201ENST00000446518 666 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 AC093850.1-201ENST00000454121 251 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 LRRC6P1-201ENST00000532188 885 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 MRPS36P5-201ENST00000551909 298 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 AC021231.3-201ENST00000558497 370 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 MIR8054-201ENST00000620877 86 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 AP003072.5-201ENST00000623872 773 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 MIR4320-201ENST00000636981 65 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 AC099786.3-201ENST00000565735 1410 ntBASIC-1.17□□□□□ -2.6
LINC01546A6NGU7 SNORA72.1-201ENST00000363485 129 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 SNORD32B-201ENST00000364460 84 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AL590002.1-201ENST00000406554 418 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 MIR1302-7-201ENST00000408841 72 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC010385.1-201ENST00000412374 256 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 SUMO1P2-201ENST00000452524 304 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC010531.2-201ENST00000465012 153 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC021146.6-201ENST00000514659 117 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 SNORD39.3-201ENST00000584451 71 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 AC022217.4-201ENST00000604389 163 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 HMGB1P51-201ENST00000605166 638 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 SNORD38B-202ENST00000625943 69 ntBASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.18□□□□□ -2.6
LINC01546A6NGU7 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 SUMO1P3-201ENST00000439961 304 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AL392103.1-201ENST00000447000 198 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AL139824.2-201ENST00000458731 1095 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 RNA5SP216-201ENST00000516111 123 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AC090617.3-201ENST00000573670 475 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 MIR4677-201ENST00000584153 80 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 7SK.7-201ENST00000603504 247 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AC020891.4-201ENST00000605745 93 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AC093726.3-201ENST00000637588 150 ntBASIC-1.19□□□□□ -2.6
LINC01546A6NGU7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 RNU6-188P-201ENST00000364207 107 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 RNU4-56P-201ENST00000364700 142 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 RNU6-47P-201ENST00000383866 107 ntBASIC-1.2□□□□□ -2.6
LINC01546A6NGU7 RNU6-440P-201ENST00000390882 105 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms