Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Y_RNA.143-201ENST00000363520 106 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.149-201ENST00000363558 117 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-961P-201ENST00000363893 105 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 MIR300-201ENST00000401138 83 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP504-201ENST00000410676 117 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 RAB28P5-201ENST00000427490 651 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 HMGN2P18-201ENST00000450680 270 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC018868.1-201ENST00000491307 315 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC233702.2-202ENST00000562547 291 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC013412.1-201ENST00000610687 192 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -1.99
MBD3L4A6NDZ8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
MBD3L4A6NDZ8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.59□□□□□ -2
MBD3L4A6NDZ8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.183-201ENST00000363882 113 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.276-201ENST00000364732 109 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 SNORD31B-201ENST00000364977 69 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 SNORA51.4-201ENST00000364993 124 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 SNORA72.2-201ENST00000365028 127 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RNU6-611P-201ENST00000384276 104 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RNU6-713P-201ENST00000384761 107 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 MIR586-201ENST00000385035 97 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RNU2-20P-201ENST00000410425 191 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 ELOCP20-201ENST00000422460 345 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 AC074290.1-201ENST00000448883 135 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 AC114982.1-201ENST00000469402 321 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RN7SL442P-201ENST00000473804 320 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 HMGN2P9-201ENST00000476875 229 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 RPL26P26-201ENST00000480251 434 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 PRR13P7-201ENST00000605538 430 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 MIR376A1-201ENST00000616574 68 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
MBD3L4A6NDZ8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MBD3L4A6NDZ8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.133-201ENST00000363428 110 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 SNORA67.2-201ENST00000384300 149 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RNU6-937P-201ENST00000384325 106 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RPL21P1-201ENST00000399532 476 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RNA5SP492-201ENST00000411330 114 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 AC005002.2-201ENST00000438228 269 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RN7SL633P-201ENST00000488974 297 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 MIR3945-201ENST00000581853 98 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 AC025754.2-201ENST00000606491 432 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.57□□□□□ -2
MBD3L4A6NDZ8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
MBD3L4A6NDZ8 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.19-201ENST00000362462 99 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.47-201ENST00000362697 108 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-626P-201ENST00000363354 107 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-770P-201ENST00000363929 105 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-20P-201ENST00000384106 107 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.512-201ENST00000384518 102 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 Y_RNA.574-201ENST00000384766 95 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-1109P-201ENST00000391187 107 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AC087499.2-201ENST00000432861 149 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AL137159.1-201ENST00000452808 512 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AC016925.1-201ENST00000458303 298 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 RNU6-1143P-201ENST00000516125 104 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
MBD3L4A6NDZ8 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AC005176.2-201ENST00000596933 147 ntBASIC2.56□□□□□ -2
MBD3L4A6NDZ8 AL109918.3-201ENST00000603072 338 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms