Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL078595.3-201ENST00000623815 1166 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL138960.2-201ENST00000625145 535 ntBASIC0.24□□□□□ -2.37
TCRBV4S1A1TA0A5B7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 CASC19-280ENST00000642102 1351 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 U3.8-201ENST00000363675 217 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-157P-201ENST00000383957 107 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-550P-201ENST00000391057 101 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 SNORD99-201ENST00000408612 74 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC004866.1-201ENST00000411748 78 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTCO2P21-201ENST00000419780 677 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC245047.3-201ENST00000429428 127 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC092423.1-201ENST00000430165 186 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 FABP5P4-201ENST00000437203 171 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL031313.1-201ENST00000448435 256 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTCO2P6-201ENST00000463134 685 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC116562.3-201ENST00000506136 177 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC022616.3-201ENST00000523940 148 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC068587.5-201ENST00000528506 175 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC007834.2-201ENST00000536310 343 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL391840.1-201ENST00000571144 367 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR4514-201ENST00000581410 57 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC069431.2-201ENST00000604149 1099 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC012557.2-201ENST00000605919 418 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC097065.2-201ENST00000608159 533 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC073349.3-201ENST00000617616 186 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC005562.2-201ENST00000618264 111 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC013437.2-201ENST00000639587 677 ntBASIC0.23□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-222P-201ENST00000362438 107 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-199P-201ENST00000362954 107 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-827P-201ENST00000365553 106 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU4-48P-201ENST00000365559 182 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-440P-201ENST00000390882 105 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL031274.1-201ENST00000450334 232 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC233266.1-201ENST00000454518 96 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 snoU13.6-201ENST00000458785 104 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 snoU13.25-201ENST00000458945 104 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC079382.1-201ENST00000493346 557 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AK3P2-201ENST00000507976 429 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC025465.4-201ENST00000513422 638 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 SCARNA24.1-201ENST00000516465 137 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU6-1178P-201ENST00000516674 107 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNA5SP330-201ENST00000517096 96 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC091805.2-201ENST00000603848 235 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC242852.1-201ENST00000612151 96 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AL607023.1-201ENST00000620045 248 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AC244015.1-201ENST00000622301 99 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TCRBV4S1A1TA0A5B7 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MRPL42P3-201ENST00000401492 326 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL451046.2-201ENST00000403074 277 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL034345.1-201ENST00000407768 123 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR1253-201ENST00000408273 105 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR1197-201ENST00000408818 88 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Y_RNA.608-201ENST00000410647 95 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MTND3P17-201ENST00000416968 344 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 DAP3P1-201ENST00000441522 278 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC004386.2-201ENST00000441858 148 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 NFU1P2-201ENST00000448700 469 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA70.12-201ENST00000516084 153 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU1-142P-201ENST00000516682 145 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU7-128P-201ENST00000517247 62 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AP002001.1-203ENST00000534002 267 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL360219.1-201ENST00000610230 366 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AL359075.3-201ENST00000613288 217 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC009159.2-201ENST00000617603 606 ntBASIC0.21□□□□□ -2.38
TCRBV4S1A1TA0A5B7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 MIR625-201ENST00000385047 85 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNORA16.2-201ENST00000390991 127 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 RNU6-57P-201ENST00000411348 103 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 CDK8P2-201ENST00000415020 547 ntBASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.2□□□□□ -2.38
TCRBV4S1A1TA0A5B7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms