Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC005776.1-201ENST00000603164 290 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AL139022.2-201ENST00000606934 443 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 uc_338.34-201ENST00000617467 174 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 MIR6734-201ENST00000621166 68 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AL359757.2-201ENST00000624309 274 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-433P-201ENST00000363216 104 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC012306.1-201ENST00000423267 114 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AL596276.1-201ENST00000434465 418 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 MTND4P15-201ENST00000437913 1033 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC010469.2-201ENST00000496412 480 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 SNORA25.12-201ENST00000516202 82 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 RNU7-51P-201ENST00000516560 62 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC025647.1-201ENST00000517879 253 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC013828.2-201ENST00000532487 235 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 MIR3118-1-201ENST00000581787 76 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC104408.1-201ENST00000605241 170 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC024060.1-201ENST00000607052 494 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 PART1_2.1-201ENST00000612397 250 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 AC010487.4-201ENST00000637027 61 ntBASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.22□□□□□ -2.44
TCRBV3S1A0A5B6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AC073343.1-201ENST00000328239 651 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA25.3-201ENST00000363205 127 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-723P-201ENST00000383973 107 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA24.1-201ENST00000384401 135 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 MIR526A1-201ENST00000384897 85 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RNU1-139P-201ENST00000391307 165 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA40.8-201ENST00000411034 126 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AC004866.1-201ENST00000411748 78 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RPL17P35-201ENST00000432217 549 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 USP9YP29-201ENST00000445112 563 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AC104136.1-201ENST00000512969 394 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AC109479.2-201ENST00000517842 174 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RPL23AP91-201ENST00000569211 455 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 MTND4LP25-201ENST00000570218 163 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 7SK.7-201ENST00000603504 247 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-88P-201ENST00000606801 100 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AL136221.1-201ENST00000621449 509 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AL356596.1-201ENST00000624230 379 ntBASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.23□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-369P-201ENST00000362515 102 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-994P-201ENST00000410507 111 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AL353777.1-201ENST00000425552 326 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC004854.1-201ENST00000440356 349 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 RNU7-57P-201ENST00000459540 60 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC074133.1-201ENST00000515696 183 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-237P-201ENST00000515985 71 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 RN7SKP164-201ENST00000516138 266 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC090517.2-201ENST00000614966 680 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC008250.2-201ENST00000615261 205 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC022709.1-201ENST00000615967 87 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC005562.2-201ENST00000618264 111 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 AC006386.1-201ENST00000619436 415 ntBASIC-0.24□□□□□ -2.45
TCRBV3S1A0A5B6 SNORD114-5-201ENST00000362928 70 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 SNORD83.1-201ENST00000411362 77 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC004386.2-201ENST00000441858 148 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 ELOCP24-201ENST00000456370 334 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-201P-201ENST00000517100 61 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC023050.3-201ENST00000541142 333 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC112693.2-201ENST00000556538 232 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC009712.1-201ENST00000564938 316 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 MIR3678-201ENST00000578455 94 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 MIR3612-201ENST00000579753 87 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 MIR4300-201ENST00000581016 96 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 MIR4298-201ENST00000584380 73 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC104695.3-201ENST00000604052 296 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA28-201ENST00000606769 126 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 AC007684.1-201ENST00000609671 477 ntBASIC-0.25□□□□□ -2.45
TCRBV3S1A0A5B6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 SNORD56.2-201ENST00000363242 71 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 SNORD118-201ENST00000363593 134 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 SNORD113.3-201ENST00000364630 78 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA67.2-201ENST00000384300 149 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 MIR586-201ENST00000385035 97 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms