Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SNORA59B-202ENST00000578183 701 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC068790.6-201ENST00000602558 258 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC007014.2-201ENST00000615581 479 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC006504.8-201ENST00000621046 635 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 Y_RNA.157-201ENST00000363638 102 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 SNORD116-11-201ENST00000383882 92 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-790P-201ENST00000384479 105 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 MTND1P34-201ENST00000438556 671 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AL035666.1-201ENST00000446195 348 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AL163540.1-201ENST00000485382 386 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AP000907.4-201ENST00000604143 237 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AL022345.1-201ENST00000607292 135 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC233981.2-201ENST00000611524 1614 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AC084782.3-201ENST00000612282 578 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.53□□□□□ -2.16
SMIM28A0A1B0GU29 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-545P-201ENST00000362681 104 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 SNORD31B-201ENST00000364977 69 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP118-201ENST00000410385 109 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 DAP3P1-201ENST00000441522 278 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 MTCO1P44-201ENST00000441935 243 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 SNRPGP13-201ENST00000442212 177 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 NFU1P2-201ENST00000448700 469 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 OR2AQ1P-201ENST00000451972 200 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 PCMTD1P1-201ENST00000455560 355 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 RPL23AP75-201ENST00000491601 451 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 MTCO2P30-201ENST00000503662 364 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AL359821.1-201ENST00000605519 182 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC005562.2-201ENST00000618264 111 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC130454.1-201ENST00000622948 401 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC009033.1-201ENST00000624279 431 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 SCARNA4-201ENST00000629045 128 ntBASIC1.52□□□□□ -2.17
SMIM28A0A1B0GU29 AC027514.1-201ENST00000588561 1603 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-1059P-201ENST00000363752 98 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.573-201ENST00000384763 105 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 SNORA48.1-201ENST00000390879 135 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-321P-201ENST00000410912 106 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 RPL30P16-201ENST00000419341 429 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 MTCO3P8-201ENST00000453691 755 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 RNU4-49P-201ENST00000516080 140 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 MIR4713-201ENST00000582691 75 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 U1.36-201ENST00000620684 176 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 AL133216.2-202ENST00000634512 349 ntBASIC1.51□□□□□ -2.17
SMIM28A0A1B0GU29 MTND4P5-201ENST00000435821 1374 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.86-201ENST00000363020 111 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-438P-201ENST00000365561 103 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-192P-201ENST00000391253 100 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 RPL31P63-201ENST00000422565 375 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AC004386.2-201ENST00000441858 148 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 FO393415.2-201ENST00000480085 343 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 RPS23P5-201ENST00000495419 428 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AC005840.1-201ENST00000498412 377 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 POLR3GP2-201ENST00000588366 668 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 CYP2C61P-201ENST00000604072 290 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms