Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC139792.3-201ENST00000623525 224 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU4-21P-201ENST00000362802 126 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-505P-201ENST00000384427 107 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-606P-201ENST00000384721 111 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-903P-201ENST00000391270 109 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC114482.1-201ENST00000418010 247 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC133104.1-201ENST00000429100 218 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC005002.2-201ENST00000438228 269 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 NFU1P2-201ENST00000448700 469 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 SNORD124-201ENST00000459577 104 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 GMFBP1-201ENST00000467831 427 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC048334.1-201ENST00000477975 159 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 CCDC34P1-201ENST00000507441 517 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 PSMC1P5-201ENST00000512850 177 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 SNORA31.2-201ENST00000516019 134 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-232P-201ENST00000517144 64 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AP002963.1-201ENST00000530590 184 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AL137161.1-201ENST00000532231 390 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 CYP3A137P-201ENST00000562436 69 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC025449.1-201ENST00000603896 529 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC097065.2-201ENST00000608159 533 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC079248.2-201ENST00000623779 326 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 AC009161.2-201ENST00000624626 138 ntBASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV41A0A0B4J266 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 SNORD114-24-201ENST00000365029 72 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-17P-201ENST00000384245 107 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-18P-201ENST00000384527 107 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 MIR515-2-201ENST00000384883 83 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 MIR515-1-201ENST00000384884 83 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-910P-201ENST00000390844 107 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-57P-201ENST00000411348 103 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC009237.7-201ENST00000447357 229 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 SNORD42A-201ENST00000459584 64 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC103851.1-201ENST00000506833 274 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC060788.1-201ENST00000521318 469 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC136628.3-201ENST00000521868 290 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC016256.1-201ENST00000547971 354 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 MTATP6P3-201ENST00000581686 676 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC068790.2-201ENST00000602601 557 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC245014.2-201ENST00000603689 287 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC246785.4-201ENST00000605374 287 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC027449.1-201ENST00000608890 407 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RMST_3.1-201ENST00000611651 109 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AF246928.1-201ENST00000623768 87 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 AC027514.1-201ENST00000588561 1603 ntBASIC0.56□□□□□ -2.32
TRAV41A0A0B4J266 RNU4-79P-201ENST00000362764 141 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 Y_RNA.226-201ENST00000364337 114 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-1305P-201ENST00000364353 104 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 SNORA67.2-201ENST00000384300 149 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MIR608-201ENST00000384820 100 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MIR487A-201ENST00000385009 80 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MIR1287-201ENST00000408492 90 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RNU2-29P-201ENST00000410423 189 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RPS26P42-201ENST00000413485 326 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AL606490.4-201ENST00000423117 127 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MTND3P9-201ENST00000429526 346 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RNU7-180P-201ENST00000459240 63 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC079140.5-201ENST00000507882 310 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RNA5SP168-201ENST00000516642 112 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-922P-201ENST00000516753 99 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC024995.1-201ENST00000523014 93 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AP001372.4-201ENST00000524889 472 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MRPS36P4-201ENST00000534436 298 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC026470.2-201ENST00000561492 181 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AP000907.4-201ENST00000604143 237 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 U2.17-201ENST00000611454 95 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 AC008163.1-202ENST00000636004 2889 ntBASIC0.55□□□□□ -2.32
TRAV41A0A0B4J266 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms