Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 CASC19-280ENST00000642102 1351 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-1287P-201ENST00000362914 107 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORD114-23-201ENST00000363536 72 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 U3.8-201ENST00000363675 217 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU4-76P-201ENST00000364509 141 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-1335P-201ENST00000365426 107 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 Y_RNA.367-201ENST00000365544 101 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORA67.2-201ENST00000384300 149 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-1060P-201ENST00000384664 107 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR586-201ENST00000385035 97 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR549A-201ENST00000385268 96 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-440P-201ENST00000390882 105 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RPS26P42-201ENST00000413485 326 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AL596276.1-201ENST00000434465 418 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 MTATP6P14-201ENST00000455189 673 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU2-69P-201ENST00000516061 100 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU1-142P-201ENST00000516682 145 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RN7SL793P-201ENST00000583259 296 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 Z99497.2-201ENST00000603634 310 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AC006001.4-201ENST00000622243 395 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AL049777.1-201ENST00000622740 518 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 AC106754.2-201ENST00000623006 233 ntBASIC0.32□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU4-12P-201ENST00000365233 139 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU4-48P-201ENST00000365559 182 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-393P-201ENST00000384475 107 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-906P-201ENST00000384700 70 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR122-201ENST00000385044 85 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNA5SP323-201ENST00000391094 133 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 MRPL42P3-201ENST00000401492 326 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AL031577.2-201ENST00000404133 280 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC004866.1-201ENST00000411748 78 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC004386.2-201ENST00000441858 148 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC009237.7-201ENST00000447357 229 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU7-90P-201ENST00000459216 62 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORD27.1-201ENST00000516319 72 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU7-128P-201ENST00000517247 62 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 DEFB108E-201ENST00000524692 240 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC112191.3-201ENST00000604371 277 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AL359075.3-201ENST00000613288 217 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 U6.114-201ENST00000636407 96 ntBASIC0.31□□□□□ -2.36
TRAV1-1A0A0B4J248 AC121333.1-201ENST00000567488 2709 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-500P-201ENST00000362349 107 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORD113-6-201ENST00000363345 75 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 Y_RNA.393-201ENST00000383936 102 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-74P-201ENST00000384235 107 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 Y_RNA.466-201ENST00000384294 113 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-434P-201ENST00000384376 107 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNY1P4-201ENST00000384595 115 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORA75.2-201ENST00000391138 150 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 SNORA75.3-201ENST00000391231 150 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR936-201ENST00000401264 98 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AL355143.1-201ENST00000407101 841 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AL034345.1-201ENST00000407768 123 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC104850.1-201ENST00000435940 476 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 FABP5P4-201ENST00000437203 171 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AL031274.1-201ENST00000450334 232 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AL049830.1-201ENST00000468034 425 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC091951.3-201ENST00000504093 246 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-405P-201ENST00000516637 110 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU2-46P-201ENST00000517038 113 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC025647.1-201ENST00000517879 253 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MTND4P33-201ENST00000556706 766 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR4509-3-201ENST00000578671 94 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR5006-201ENST00000583027 110 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR4509-2-201ENST00000583920 94 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC012557.2-201ENST00000605919 418 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC002044.1-201ENST00000606707 158 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 AC027807.2-201ENST00000616099 408 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 MIR4509-1-201ENST00000618224 94 ntBASIC0.3□□□□□ -2.36
TRAV1-1A0A0B4J248 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 AC009541.1-201ENST00000438279 2662 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU6-199P-201ENST00000362954 107 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU5B-2P-201ENST00000363036 113 ntBASIC0.29□□□□□ -2.36
TRAV1-1A0A0B4J248 RNU5E-5P-201ENST00000365379 116 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms