Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MIR300-201ENST00000401138 83 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 AL139109.1-201ENST00000455491 297 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 RN7SL293P-201ENST00000481765 281 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.65-201ENST00000362846 100 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-200P-201ENST00000364743 107 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-234P-201ENST00000365229 104 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 MIR449B-201ENST00000384995 97 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 MTCO1P5-201ENST00000433573 344 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RPL23AP3-201ENST00000453844 468 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 CYP2C59P-201ENST00000457790 269 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RPL7P49-201ENST00000471402 708 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-155P-201ENST00000516347 100 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-966P-201ENST00000516479 104 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 SNORA27.4-201ENST00000516650 95 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 AC135776.4-201ENST00000624300 1904 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
PCDHA9Q9Y5H5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-454P-201ENST00000364292 107 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RNU2-14P-201ENST00000411053 191 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RPL23AP58-201ENST00000440453 469 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AL161788.1-201ENST00000441805 169 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC090515.1-201ENST00000465295 476 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 SRIP1-201ENST00000489235 288 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.700-201ENST00000516806 100 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 MIR3616-201ENST00000584070 92 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 AC093908.1-201ENST00000623125 8092 ntBASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHA9Q9Y5H5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.269-201ENST00000364685 89 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 Y_RNA.275-201ENST00000364726 110 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 MIR548B-201ENST00000385247 97 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-1248P-201ENST00000391096 64 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 SNORA48.8-201ENST00000391324 134 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 RNU2-64P-201ENST00000411315 191 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 MRPS10P1-201ENST00000448483 130 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 RNU7-14P-201ENST00000459331 62 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 RPL21P10-201ENST00000463521 490 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 MIR4643-201ENST00000577473 78 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AL512605.2-201ENST00000592972 256 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 AL162424.1-201ENST00000602325 221 ntBASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHA9Q9Y5H5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6-740P-201ENST00000364734 105 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 FO393413.1-201ENST00000402892 195 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 MIR1283-1-201ENST00000408494 87 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 AC009310.1-201ENST00000414414 451 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 HMGN2P9-201ENST00000476875 229 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 AC091959.1-201ENST00000495857 238 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 MIR449C-201ENST00000516047 92 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 MIR3684-201ENST00000579779 74 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms