Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AP005660.1-201ENST00000522972 293 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 GNAI2P1-201ENST00000541815 315 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 MIR3683-201ENST00000580847 82 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 POLR3GP2-201ENST00000588366 668 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AC060780.3-201ENST00000589464 80 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AC124303.1-201ENST00000605703 360 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 AC019193.3-201ENST00000609144 554 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHGA1Q9Y5H4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 RNU6-438P-201ENST00000365561 103 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 RPL30P16-201ENST00000419341 429 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AC123900.1-201ENST00000420390 96 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 RNA5SP454-201ENST00000517231 127 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AC009248.2-201ENST00000619826 254 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 AL359697.1-201ENST00000624879 587 ntBASIC1.91□□□□□ -2.1
PCDHGA1Q9Y5H4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PCDHGA1Q9Y5H4 MTND4P1-201ENST00000457501 1466 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC079354.2-201ENST00000453523 154 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 RPL23AP75-201ENST00000491601 451 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AF186996.7-201ENST00000492781 209 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU2-44P-201ENST00000516795 194 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU6-273P-201ENST00000516937 96 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC090517.1-201ENST00000569307 266 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 AC084782.3-201ENST00000612282 578 ntBASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PCDHGA1Q9Y5H4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU1-76P-201ENST00000362903 159 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 SNORA48.1-201ENST00000390879 135 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 MTND1P17-201ENST00000448961 204 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 ATP5EP1-201ENST00000510257 156 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 ACA59.1-201ENST00000515966 143 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 MIR4781-201ENST00000585250 76 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 AC137590.2-201ENST00000619709 240 ntBASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PCDHGA1Q9Y5H4 MIR378A-201ENST00000362177 66 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 Y_RNA.248-201ENST00000364501 109 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 MIR1287-201ENST00000408492 90 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 AC009310.1-201ENST00000414414 451 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 MTCO3P46-201ENST00000425787 232 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 Z82205.1-201ENST00000428456 297 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 AC007215.1-201ENST00000464893 276 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 TOMM22P6-201ENST00000465035 409 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 AC087477.1-201ENST00000465747 340 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RPS23P5-201ENST00000495419 428 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 LINC02555-201ENST00000563933 1951 ntBASIC1.88□□□□□ -2.11
PCDHGA1Q9Y5H4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 Y_RNA.72-201ENST00000362894 103 ntBASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 RNU6-596P-201ENST00000365395 98 ntBASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 AL356776.1-201ENST00000406574 447 ntBASIC1.87□□□□□ -2.11
PCDHGA1Q9Y5H4 AC027124.2-201ENST00000428249 105 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms