Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC007318.2-201ENST00000620999 243 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 U6.92-201ENST00000636464 89 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AL136360.1-201ENST00000503377 1900 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 RNU1-62P-201ENST00000362599 164 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-873P-201ENST00000363833 107 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 MIR218-1-201ENST00000384999 110 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 SNORA46.1-201ENST00000391069 153 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 HSPE1P18-201ENST00000517602 280 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AP003733.2-201ENST00000529409 171 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 MIR4319-201ENST00000577285 85 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC105245.1-201ENST00000581934 244 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC010999.1-201ENST00000611856 324 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 MIR5739-201ENST00000619803 80 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC090517.3-201ENST00000625170 141 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 AC138915.1-201ENST00000565427 1685 ntBASIC2.95□□□□□ -1.94
PCDHB1Q9Y5F3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.350-201ENST00000365409 98 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-318P-201ENST00000384283 103 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 MIR329-1-201ENST00000385028 80 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 RNU2-20P-201ENST00000410425 191 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 SNORD12B-201ENST00000410433 91 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 AC067942.3-201ENST00000512025 362 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 MIR3616-201ENST00000584070 92 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.94□□□□□ -1.94
PCDHB1Q9Y5F3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 MRPL35P1-201ENST00000404272 572 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 HMGB3P17-201ENST00000504195 649 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC023141.11-201ENST00000508864 202 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-586P-201ENST00000517265 104 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC136932.1-201ENST00000574771 208 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 MIR4659A-201ENST00000580269 81 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 MIR3945-201ENST00000581853 98 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC012433.1-201ENST00000588916 398 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC010900.2-201ENST00000604508 210 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC011476.5-201ENST00000615594 130 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC240442.1-201ENST00000616055 283 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 AC005562.2-201ENST00000618264 111 ntBASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHB1Q9Y5F3 SNORA18.3-201ENST00000384122 132 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-793P-201ENST00000384233 104 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-847P-201ENST00000411115 108 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AL513477.1-202ENST00000417061 214 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AC105272.1-201ENST00000438604 198 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AC108938.1-201ENST00000451204 136 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AC007395.1-201ENST00000451333 677 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 CYP2C59P-201ENST00000457790 269 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 ELOCP29-201ENST00000588193 334 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 MTND5P6-201ENST00000422338 1798 ntBASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PCDHB1Q9Y5F3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 RNA5SP361-201ENST00000362686 118 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 SNORD32B-201ENST00000364460 84 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.91□□□□□ -1.94
PCDHB1Q9Y5F3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms