Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC137590.2-201ENST00000619709 240 ntBASIC2.2□□□□□ -2.06
YIPF1Q9Y548 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 MTND5P10-201ENST00000603719 1809 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.146-201ENST00000363549 102 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 SNORD115-32-201ENST00000364079 82 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 MIR561-201ENST00000385216 97 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 RNU6-700P-201ENST00000391043 107 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AL139156.1-201ENST00000412785 841 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AL139109.1-201ENST00000455491 297 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 AC016727.2-201ENST00000603988 621 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.15-201ENST00000611544 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 RMST_6.1-201ENST00000611980 203 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.16-201ENST00000613119 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.12-201ENST00000613778 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.20-201ENST00000613956 192 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.9-201ENST00000615427 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.11-201ENST00000616345 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.2-201ENST00000616535 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.3-201ENST00000617785 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.19-201ENST00000618602 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 RNU2-1-201ENST00000618664 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.6-201ENST00000619225 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.5-201ENST00000619465 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 U2.10-201ENST00000620268 191 ntBASIC2.19□□□□□ -2.06
YIPF1Q9Y548 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
YIPF1Q9Y548 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AL356292.1-201ENST00000283110 373 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.315-201ENST00000365117 102 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 RNU6-546P-201ENST00000383991 107 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 RNU6-17P-201ENST00000384245 107 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 RNU6-18P-201ENST00000384527 107 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR559-201ENST00000385188 96 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 RPS26P42-201ENST00000413485 326 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AL445305.1-201ENST00000432577 575 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 HMGB3P3-201ENST00000510526 400 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC090517.1-201ENST00000569307 266 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC025754.2-201ENST00000606491 432 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR1244-1-201ENST00000612829 85 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AL359314.1-201ENST00000616913 261 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 AC090574.1-201ENST00000623186 233 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR1244-3-201ENST00000635744 85 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR1244-2-201ENST00000636449 85 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 MIR1244-4-202ENST00000636813 85 ntBASIC2.18□□□□□ -2.06
YIPF1Q9Y548 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
YIPF1Q9Y548 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 RNU6-874P-201ENST00000362390 105 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 RNU6-1040P-201ENST00000383974 107 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 MIR190B-201ENST00000401119 79 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 RNU2-48P-201ENST00000410694 191 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 MTCYBP10-201ENST00000424905 650 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC027124.2-201ENST00000428249 105 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC092423.1-201ENST00000430165 186 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 HMGN1P13-201ENST00000505795 138 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 SNORA31.11-201ENST00000516528 139 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.706-201ENST00000516933 99 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 RNU6-699P-201ENST00000517081 110 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC015712.3-201ENST00000559380 164 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 SUB1P3-201ENST00000564581 315 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 AC100812.1-201ENST00000607622 580 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.783-201ENST00000613546 102 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 MIR1248-201ENST00000629190 106 ntBASIC2.17□□□□□ -2.06
YIPF1Q9Y548 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.17□□□□□ -2.06
YIPF1Q9Y548 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.106-201ENST00000363189 100 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.813-201ENST00000364639 102 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.394-201ENST00000383942 103 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 RNU6-26P-201ENST00000383985 107 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.431-201ENST00000384086 102 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 Y_RNA.460-201ENST00000384255 102 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 RNU6-1156P-201ENST00000410365 100 ntBASIC2.16□□□□□ -2.06
YIPF1Q9Y548 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.16□□□□□ -2.06
YIPF1Q9Y548 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms