Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 AL353746.1-201ENST00000566293 6881 ntBASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 MAPK10-372ENST00000641954 3413 ntBASIC3.82□□□□□ -1.8
FNDC3AQ9Y2H6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 SNORD32B-201ENST00000364460 84 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 U8.7-201ENST00000364940 136 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 AL139095.1-201ENST00000404326 391 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 RNU6-383P-201ENST00000410864 94 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 EIF4EP4-201ENST00000424916 578 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 HMGN2P9-201ENST00000476875 229 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 AC117454.1-201ENST00000491120 168 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 SNORA31.1-201ENST00000515993 133 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 SNORA31.5-201ENST00000516190 133 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 AC008739.2-201ENST00000597006 317 ntBASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FNDC3AQ9Y2H6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 RNU6-199P-201ENST00000362954 107 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 Y_RNA.229-201ENST00000364347 113 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 Y_RNA.337-201ENST00000365312 102 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 SNORD14D-201ENST00000384390 87 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 MIR199A2-201ENST00000385289 110 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 MIR767-201ENST00000390228 109 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 RN7SL293P-201ENST00000481765 281 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 AC006445.1-201ENST00000491925 405 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 MIR4724-201ENST00000579485 89 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 AC068647.2-201ENST00000637380 353 ntBASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.8□□□□□ -1.8
FNDC3AQ9Y2H6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AL136164.4-201ENST00000625013 2135 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 RNVU1-14-201ENST00000384770 164 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AL606845.1-201ENST00000404881 255 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AL355796.1-201ENST00000406706 323 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AC008267.6-201ENST00000441664 139 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AC106707.2-201ENST00000484182 374 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FNDC3AQ9Y2H6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RNU6-407P-201ENST00000365280 104 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 MIR15B-201ENST00000385045 98 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 SNORD37.2-201ENST00000391075 66 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RNU6-1211P-201ENST00000459179 105 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RNU7-14P-201ENST00000459331 62 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RNU7-57P-201ENST00000459540 60 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 MIR4765-201ENST00000585007 77 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RPL17P51-201ENST00000605218 238 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 AL391903.3-201ENST00000612158 163 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 AL513302.2-201ENST00000562313 1842 ntBASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
FNDC3AQ9Y2H6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms