Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CBX3P1-201ENST00000325243 554 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-562P-201ENST00000362731 107 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 SNORD50.1-201ENST00000362987 71 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.151-201ENST00000363566 112 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.157-201ENST00000363638 102 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.295-201ENST00000364918 102 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 SNORA18.2-201ENST00000383865 132 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 MIR934-201ENST00000401241 83 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AL033519.2-201ENST00000403958 392 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP494-201ENST00000410653 129 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC009310.1-201ENST00000414414 451 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 UBE2V1P8-201ENST00000437166 265 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 DAP3P1-201ENST00000441522 278 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC079354.2-201ENST00000453523 154 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 RNU7-14P-201ENST00000459331 62 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 RPS23P5-201ENST00000495419 428 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-1314P-201ENST00000517139 104 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC015712.3-201ENST00000559380 164 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC026470.2-201ENST00000561492 181 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 MIR3976-201ENST00000606807 139 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AC103810.8-201ENST00000607347 118 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRAPPC4Q9Y296 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 SNORD115-47-201ENST00000391226 86 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-1148P-201ENST00000410992 104 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC139712.2-201ENST00000424302 339 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 MTCO1P44-201ENST00000441935 243 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 SNRPEP8-201ENST00000442866 260 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AL357134.1-201ENST00000445848 426 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 OR2AQ1P-201ENST00000451972 200 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 PCMTD1P1-201ENST00000455560 355 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC007215.1-201ENST00000464893 276 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC011352.1-201ENST00000512300 793 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-864P-201ENST00000516256 108 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 MIR3942-201ENST00000585264 109 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC005786.1-201ENST00000588553 154 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC016727.2-201ENST00000603988 621 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC005562.2-201ENST00000618264 111 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC139792.2-201ENST00000624218 587 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 AC233981.2-201ENST00000611524 1614 ntBASIC1.37□□□□□ -2.19
TRAPPC4Q9Y296 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-438P-201ENST00000365561 103 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 SNORD116-11-201ENST00000383882 92 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.453-201ENST00000384223 109 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MIR548F1-201ENST00000408667 84 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC130509.1-201ENST00000464158 433 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 RPL23AP75-201ENST00000491601 451 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MTCO2P30-201ENST00000503662 364 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC108210.2-201ENST00000503681 201 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 RNVU1-2-201ENST00000516326 135 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC104984.5-201ENST00000586878 94 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 AC009033.1-201ENST00000624279 431 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 SCARNA4-201ENST00000629045 128 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MIR3662-201ENST00000637030 95 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 MTND5P9-201ENST00000503854 1755 ntBASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAPPC4Q9Y296 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 U8.10-201ENST00000384260 133 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-790P-201ENST00000384479 105 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-831P-201ENST00000384548 107 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 MIR517A-201ENST00000385001 87 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 MIR764-201ENST00000390811 85 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC009161.1-201ENST00000417306 376 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC007395.1-201ENST00000451333 677 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP57-201ENST00000459463 123 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms