Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AL139824.2-201ENST00000458731 1095 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 SCARNA8-201ENST00000515924 131 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 MIR4789-201ENST00000577469 82 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 MTND3P19-201ENST00000603825 345 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AC124016.2-201ENST00000610058 665 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 AP000484.1-201ENST00000620067 1252 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 SNORD98-201ENST00000636377 67 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.32□□□□□ -2.46
SHANK2Q9UPX8 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 RNA5SP517-201ENST00000364724 117 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 SNORD65.1-201ENST00000390889 71 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 RNA5SP467-201ENST00000391274 118 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 RN7SKP266-201ENST00000410232 287 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 AC092809.3-201ENST00000415453 231 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 SNORA40.12-201ENST00000516329 111 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 AL592221.1-201ENST00000605266 382 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 SEPT14P17-201ENST00000617978 177 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 MIR8054-201ENST00000620877 86 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 SCARNA4-202ENST00000625402 129 ntBASIC-0.33□□□□□ -2.46
SHANK2Q9UPX8 CDR1-202ENST00000625883 1485 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 BX322639.1-202ENST00000423987 2213 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 RNU6-289P-201ENST00000364093 107 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 RNU6-417P-201ENST00000384712 107 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 RNU6-679P-201ENST00000391003 106 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 RNU6-994P-201ENST00000410507 111 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 MTND4LP14-201ENST00000429447 288 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 AC104563.1-201ENST00000476147 376 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 MTCO3P9-201ENST00000506989 781 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 MIR4300-201ENST00000581016 96 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 AC022217.4-201ENST00000604389 163 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 SNORA25.18-201ENST00000607153 114 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 AC064807.4-201ENST00000607201 407 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 MIR15A-201ENST00000607334 83 ntBASIC-0.34□□□□□ -2.46
SHANK2Q9UPX8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 MIR412-201ENST00000362142 91 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 RNA5SP323-201ENST00000391094 133 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 SNORA40.8-201ENST00000411034 126 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 SNORD71-201ENST00000411292 86 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 MTND4P19-201ENST00000446659 478 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 ELOCP24-201ENST00000456370 334 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC093899.1-201ENST00000457984 376 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 LINC01399-202ENST00000458450 244 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 RBBP4P6-201ENST00000508098 202 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC104136.1-201ENST00000512969 394 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC022868.1-201ENST00000517767 391 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC112693.2-201ENST00000556538 232 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 MTND1P15-201ENST00000579262 949 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 MIR3192-201ENST00000584920 77 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC087685.1-201ENST00000587507 141 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC004223.2-201ENST00000590309 544 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC015726.2-201ENST00000620112 122 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 AC131159.1-201ENST00000621854 213 ntBASIC-0.35□□□□□ -2.46
SHANK2Q9UPX8 RNU6-545P-201ENST00000362681 104 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU6-853P-201ENST00000364306 107 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU6-142P-201ENST00000384019 107 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 MIR573-201ENST00000384964 99 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU6-440P-201ENST00000390882 105 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 MIR1827-201ENST00000408549 66 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 SNORD83.1-201ENST00000411362 77 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 STAG3L5P-204ENST00000443759 179 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 ZNF886P-201ENST00000450781 723 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU6-150P-201ENST00000516237 95 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 AF235103.2-201ENST00000525753 346 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 AC115990.1-201ENST00000526957 301 ntBASIC-0.35□□□□□ -2.47
SHANK2Q9UPX8 AC023157.2-201ENST00000540596 141 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms