Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 USP9YP16-201ENST00000430287 407 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 USP9YP23-201ENST00000455085 407 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 Y_RNA.638-201ENST00000459374 113 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC080013.2-201ENST00000460866 323 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 SNORA25.11-201ENST00000515935 105 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 MIR4524B-201ENST00000581569 115 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 ZNF861P-201ENST00000588126 639 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC125232.2-201ENST00000592457 143 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 RPL30P11-203ENST00000598995 310 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC010205.1-201ENST00000616668 449 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 AC069528.2-201ENST00000624849 1991 ntBASIC2.66□□□□□ -1.98
VPS4AQ9UN37 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS4AQ9UN37 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.65□□□□□ -1.98
VPS4AQ9UN37 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.98
VPS4AQ9UN37 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS4AQ9UN37 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 RNU6-450P-201ENST00000364654 107 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 Y_RNA.276-201ENST00000364732 109 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS4AQ9UN37 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 Y_RNA.459-201ENST00000384251 102 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 WARS2P1-201ENST00000429678 537 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 ARL5AP4-201ENST00000430731 512 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 MTND3P2-201ENST00000438452 342 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 RNU7-87P-201ENST00000459343 62 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC010655.3-201ENST00000478818 450 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC103975.1-201ENST00000482506 483 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC010469.2-201ENST00000496412 480 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 RNU6-1012P-201ENST00000516606 109 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC034114.1-201ENST00000520293 285 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AL713866.2-201ENST00000603579 219 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC124312.5-201ENST00000604451 268 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS4AQ9UN37 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC080128.1-201ENST00000474389 1917 ntBASIC2.65□□□□□ -1.99
VPS4AQ9UN37 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS4AQ9UN37 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS4AQ9UN37 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 RNU4-50P-201ENST00000364361 141 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 SNORD32B-201ENST00000364460 84 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 RNU6-245P-201ENST00000384020 107 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 RNU6-1145P-201ENST00000384246 107 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 MIR95-201ENST00000385072 81 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 SNORA46.1-201ENST00000391069 153 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 MIR208B-201ENST00000401172 77 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AL513328.1-201ENST00000446460 224 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 MTCO3P8-201ENST00000453691 755 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS4AQ9UN37 AC145146.1-201ENST00000496370 254 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 UBL5P4-201ENST00000562584 236 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 PRR13P7-201ENST00000605538 430 ntBASIC2.64□□□□□ -1.99
VPS4AQ9UN37 Z82195.2-201ENST00000612348 18351 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VPS4AQ9UN37 RNU1-76P-201ENST00000362903 159 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 U3.9-201ENST00000363823 204 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 Y_RNA.458-201ENST00000384240 102 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 RNU6-541P-201ENST00000384709 110 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 MIR329-1-201ENST00000385028 80 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 MIR29B2-201ENST00000385055 81 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 MIR628-201ENST00000385229 95 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 RNU6-1093P-201ENST00000391194 107 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 AC112220.1-201ENST00000434628 355 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS4AQ9UN37 RN7SKP49-201ENST00000516675 260 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS4AQ9UN37 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 AC105245.1-201ENST00000581934 244 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 AL121655.1-201ENST00000605811 308 ntBASIC2.63□□□□□ -1.99
VPS4AQ9UN37 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS4AQ9UN37 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS4AQ9UN37 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS4AQ9UN37 snoU2_19.1-201ENST00000362361 80 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RNU6-859P-201ENST00000362728 107 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 U8.2-201ENST00000363156 134 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RNU6-280P-201ENST00000364145 104 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RNU6-611P-201ENST00000384276 104 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 MIR568-201ENST00000385036 95 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 RNU6-1109P-201ENST00000391187 107 ntBASIC2.62□□□□□ -1.99
VPS4AQ9UN37 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms