Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR4308-201ENST00000580634 81 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AC006380.1-201ENST00000603598 186 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AL365265.1-201ENST00000621045 234 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AC008873.1-201ENST00000625051 138 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AL359854.1-201ENST00000614203 1594 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 snoU2_19.1-201ENST00000362361 80 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-774P-201ENST00000363238 107 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 SNORD87-201ENST00000364849 89 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-125P-201ENST00000384505 107 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC009414.1-201ENST00000427200 443 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC005326.1-201ENST00000429197 123 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 TOMM22P2-201ENST00000430735 237 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC115115.1-201ENST00000449927 248 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 U3.44-201ENST00000458938 192 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.662-201ENST00000516028 97 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 RNU2-27P-201ENST00000516185 142 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 RNY3P16-201ENST00000516338 101 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.703-201ENST00000516846 111 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC090877.1-201ENST00000561418 344 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AL008718.3-201ENST00000610217 321 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 SNORA50A-202ENST00000629536 136 ntBASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDC42EP3Q9UKI2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 SNORD9-201ENST00000362566 104 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 U3.8-201ENST00000363675 217 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 SNORD115-30-201ENST00000364117 82 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-923P-201ENST00000364753 107 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.361-201ENST00000365515 120 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.506-201ENST00000384494 102 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 MIR767-201ENST00000390228 109 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 RNA5SP424-201ENST00000390988 115 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 SNORA48.5-201ENST00000391143 135 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 MIR3133-201ENST00000583157 78 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 MIR8057-201ENST00000620957 69 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 AP000553.6-201ENST00000641242 118 ntBASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDC42EP3Q9UKI2 MFSD8-236ENST00000641509 4050 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AL157777.2-201ENST00000258070 137 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 SNORA12-201ENST00000391162 147 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 RN7SKP51-201ENST00000410781 304 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 Z98742.2-201ENST00000431564 187 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 RPS29P31-201ENST00000446147 164 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 RBMY2UP-201ENST00000453474 324 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-107P-201ENST00000516643 102 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AC107294.3-201ENST00000609211 526 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 AL078604.3-201ENST00000615580 211 ntBASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
CDC42EP3Q9UKI2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-187P-201ENST00000384139 106 ntBASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-394P-201ENST00000410735 107 ntBASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 TRBV12-2-201ENST00000489763 344 ntBASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 AC092185.1-201ENST00000491371 97 ntBASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.98□□□□□ -1.93
CDC42EP3Q9UKI2 SNORD59.2-201ENST00000516873 68 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms