Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RNA5SP213-201ENST00000391031 106 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 SNORA26.3-201ENST00000391119 136 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AL139095.1-201ENST00000404326 391 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 RNU6-121P-201ENST00000410525 99 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC139712.2-201ENST00000424302 339 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC078809.1-201ENST00000427601 140 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 SNRPGP7-201ENST00000469016 106 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC016632.1-201ENST00000503994 196 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AP003733.2-201ENST00000529409 171 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 AL162274.2-201ENST00000614406 332 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 AC092268.1-201ENST00000342691 405 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 MIR6073-201ENST00000352083 89 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 RNU6-137P-201ENST00000363680 108 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 Y_RNA.447-201ENST00000384184 113 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 Y_RNA.562-201ENST00000384695 113 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 MIR32-201ENST00000384965 70 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 CBX3P9-201ENST00000402326 552 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AIMP1P2-201ENST00000425294 312 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 EIF1P2-201ENST00000428233 350 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 AL139132.1-201ENST00000431587 344 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 CYP2C59P-201ENST00000457790 269 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 CKS1BP2-201ENST00000497342 240 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 RNA5SP341-201ENST00000516261 117 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 HSPE1P4-201ENST00000550617 308 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 AL450472.1-202ENST00000637286 180 ntBASIC3.1□□□□□ -1.91
USP25Q9UHP3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
USP25Q9UHP3 AC135776.4-201ENST00000624300 1904 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP25Q9UHP3 RNU6-222P-201ENST00000362438 107 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 U8.10-201ENST00000384260 133 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 SNORD78.2-201ENST00000391076 69 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 RNU2-63P-201ENST00000410792 194 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 RNU6-1114P-201ENST00000516022 107 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 AL670379.2-201ENST00000604983 252 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
USP25Q9UHP3 AC010615.1-201ENST00000594254 1764 ntBASIC3.09□□□□□ -1.91
USP25Q9UHP3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
USP25Q9UHP3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.09□□□□□ -1.92
USP25Q9UHP3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.09□□□□□ -1.92
USP25Q9UHP3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 SNORD115-8-201ENST00000363856 82 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 SNORD115-38-201ENST00000365037 82 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 RNA5SP240-201ENST00000365355 128 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 SNORD115-46-201ENST00000390982 71 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 RPS26P42-201ENST00000413485 326 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC003685.2-201ENST00000422795 395 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC244670.1-201ENST00000436879 112 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 GPM6BP3-201ENST00000442797 145 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC090515.1-201ENST00000465295 476 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 S100A11P2-201ENST00000467589 312 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 RPS29P26-201ENST00000477483 171 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC027288.2-201ENST00000553028 243 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC007375.1-201ENST00000554513 578 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC021231.3-201ENST00000558497 370 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 LARP7P3-201ENST00000579888 337 ntBASIC3.08□□□□□ -1.92
USP25Q9UHP3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.08□□□□□ -1.92
USP25Q9UHP3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.07□□□□□ -1.92
USP25Q9UHP3 Y_RNA.14-201ENST00000362415 103 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 MRPL35P1-201ENST00000404272 572 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 RNU2-38P-201ENST00000410856 79 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 RPL21P38-201ENST00000418090 167 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 ARL5AP4-201ENST00000430731 512 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 AC096638.1-201ENST00000444678 216 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 AP000870.1-201ENST00000472927 406 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 TRBVB-201ENST00000477100 408 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.07□□□□□ -1.92
USP25Q9UHP3 AC022868.1-201ENST00000517767 391 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 AC093023.1-201ENST00000547375 507 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 EIF4BP1-201ENST00000554881 351 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 AL713866.2-201ENST00000603579 219 ntBASIC3.07□□□□□ -1.92
USP25Q9UHP3 AL138963.2-201ENST00000605137 226 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms