Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNY4P36-201ENST00000391116 96 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RN7SKP284-201ENST00000411002 343 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RNU7-152P-201ENST00000458982 64 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RNU7-14P-201ENST00000459331 62 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 TOMM22P6-201ENST00000465035 409 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RPL7P42-201ENST00000481005 679 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RPL30P10-201ENST00000488148 337 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 RPS23P5-201ENST00000495419 428 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 AC002984.1-201ENST00000591692 448 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 7SK.7-201ENST00000603504 247 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 AC025754.2-201ENST00000606491 432 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 AC084781.2-201ENST00000615568 161 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.11-201ENST00000362375 109 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.384-201ENST00000383909 102 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 MIR518A2-201ENST00000384966 87 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 MIR153-2-201ENST00000385225 87 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 MTCO3P10-201ENST00000455912 772 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 RN7SKP210-201ENST00000459176 261 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 AL590705.4-201ENST00000532209 134 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 ANP32BP3-201ENST00000559213 706 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 AL133255.1-201ENST00000606374 441 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 PISRT1.1-201ENST00000616930 107 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 AL669831.3-213ENST00000636676 183 ntBASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.25□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 SNORD115-8-201ENST00000363856 82 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 RNU4-76P-201ENST00000364509 141 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 SNORD31B-201ENST00000364977 69 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 SNORD115-38-201ENST00000365037 82 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.319-201ENST00000365138 92 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 RNU6-438P-201ENST00000365561 103 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 RNU6-310P-201ENST00000384655 107 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 SNORA75.4-201ENST00000391278 119 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.646-201ENST00000410980 101 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AL139156.1-201ENST00000412785 841 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 USMG5P1-201ENST00000425964 177 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 MTND4P28-201ENST00000426217 387 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 MTND1P14-201ENST00000427400 950 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 RNU2-44P-201ENST00000516795 194 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 RNU2-19P-201ENST00000517288 84 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 IGKV3-31-201ENST00000523109 329 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 MIR4672-201ENST00000583126 81 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AL356055.1-201ENST00000602528 446 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AL160413.1-201ENST00000622780 310 ntBASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LIMA1Q9UHB6 ZNF204P-201ENST00000416749 2397 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 Y_RNA.315-201ENST00000365117 102 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU6-17P-201ENST00000384245 107 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU6-1026P-201ENST00000384465 108 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU6-18P-201ENST00000384527 107 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 MTCYBP4-201ENST00000401524 249 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 SNORA11.4-201ENST00000408823 129 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RPS20P15-201ENST00000412792 311 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 MTCO3P29-201ENST00000432119 779 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC004386.2-201ENST00000441858 148 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 MTCO3P8-201ENST00000453691 755 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU7-175P-201ENST00000515915 61 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNA5SP384-201ENST00000516615 116 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNU6-1153P-201ENST00000516760 105 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 RNA5SP54-201ENST00000516951 92 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC027288.2-201ENST00000553028 243 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 MIR5006-201ENST00000583027 110 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 SNRPGP20-201ENST00000604477 205 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 AC005014.2-201ENST00000607795 599 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 BX322639.1-202ENST00000423987 2213 ntBASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LIMA1Q9UHB6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms