Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC104465.1-201ENST00000611365 139 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 BX322639.1-202ENST00000423987 2213 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 AC092268.1-201ENST00000342691 405 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RNU4-12P-201ENST00000365233 139 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-25P-201ENST00000383873 107 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 SNORA24.1-201ENST00000384401 135 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 SNORA80D-201ENST00000384488 135 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-15P-201ENST00000384534 107 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-29P-201ENST00000384637 107 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RPL22P17-201ENST00000438729 315 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 EEF1A1P39-201ENST00000440791 250 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 MTCYBP1-201ENST00000454315 1119 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 AL163973.1-201ENST00000484753 577 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RBBP4P6-201ENST00000508098 202 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 AC112206.4-201ENST00000515142 405 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 TPRKBP2-201ENST00000565969 475 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.38□□□□□ -2.35
RIMBP3Q9UFD9 RN7SKP142-201ENST00000411236 328 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 C1DP2-201ENST00000418167 426 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AL133396.1-201ENST00000432048 687 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AC002486.1-201ENST00000435098 391 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 MTND3P1-201ENST00000441336 220 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AL162395.1-201ENST00000457882 422 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 RNU2-34P-201ENST00000516534 121 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AC078795.3-201ENST00000602913 472 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AL929325.1-201ENST00000603096 117 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 AL157786.1-207ENST00000627771 695 ntBASIC0.37□□□□□ -2.35
RIMBP3Q9UFD9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 MIR101-1-201ENST00000362265 75 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 RNU1-76P-201ENST00000362903 159 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-61P-201ENST00000365528 109 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 MIR300-201ENST00000401138 83 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 GAPDHP17-201ENST00000449858 1001 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 RPS26P48-201ENST00000491713 339 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC105758.1-201ENST00000506038 399 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-948P-201ENST00000516374 107 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC005520.5-201ENST00000613926 164 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 AC106858.1-201ENST00000637497 429 ntBASIC0.36□□□□□ -2.35
RIMBP3Q9UFD9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AF228730.1-201ENST00000397972 663 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 C1DP4-201ENST00000455429 424 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC016632.1-201ENST00000503994 196 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC104136.1-201ENST00000512969 394 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-567P-201ENST00000516746 107 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC109479.2-201ENST00000517842 174 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC022616.6-201ENST00000520479 119 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC024995.1-201ENST00000523014 93 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AL031281.1-201ENST00000604049 488 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC080013.3-201ENST00000606839 578 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC097478.2-201ENST00000610572 514 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC009509.4-201ENST00000619202 509 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 RNU6-562P-201ENST00000362731 107 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 SNORD32A-201ENST00000364805 84 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 SNORA26.3-201ENST00000391119 136 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC010154.1-201ENST00000425857 269 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 RPL37P21-201ENST00000435890 276 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC116347.2-201ENST00000514912 523 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AL353765.1-201ENST00000605514 183 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC009994.1-201ENST00000606889 253 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AC064807.4-201ENST00000607201 407 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 AL158211.2-201ENST00000607282 395 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 SNORD3E-202ENST00000627253 216 ntBASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
RIMBP3Q9UFD9 snoU2-30.2-201ENST00000362805 70 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 RNY3-201ENST00000365484 102 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 RNU6-969P-201ENST00000383900 105 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 RNU6-1031P-201ENST00000384773 107 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 RNU6-387P-201ENST00000411331 105 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 CALM2P2-201ENST00000428512 440 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 CETN4P-201ENST00000432407 469 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 AC013470.1-201ENST00000453438 462 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 AC104982.1-201ENST00000478775 574 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 BET1P1-201ENST00000482276 359 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 AC113410.1-201ENST00000505029 247 ntBASIC0.34□□□□□ -2.36
RIMBP3Q9UFD9 AC016550.1-201ENST00000505348 785 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms