Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC096772.1-201ENST00000609146 564 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 LINC02555-201ENST00000563933 1951 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DKK3Q9UBP4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC010615.1-201ENST00000594254 1764 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.89□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.447-201ENST00000384184 113 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 SNORA36A-201ENST00000384221 132 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RNU6-318P-201ENST00000384283 103 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.562-201ENST00000384695 113 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RNU6-541P-201ENST00000384709 110 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 MIR10B-201ENST00000385011 110 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RNU2-49P-201ENST00000410666 184 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 AC004383.1-201ENST00000438135 289 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 snoU13.14-201ENST00000459372 104 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 AC073901.1-201ENST00000462471 408 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RNA5SP54-201ENST00000516951 92 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 AC093023.1-201ENST00000547375 507 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 AC105137.2-201ENST00000569073 466 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 MIR3136-201ENST00000583498 78 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 RPS15AP11-201ENST00000594193 385 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 AC090425.1-201ENST00000610007 140 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 MIR7843-201ENST00000622274 79 ntBASIC2.89□□□□□ -1.95
DKK3Q9UBP4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
DKK3Q9UBP4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
DKK3Q9UBP4 RNU4-82P-201ENST00000362443 140 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AL445687.1-201ENST00000439946 251 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 TRBV12-1-201ENST00000479785 344 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 RN7SKP49-201ENST00000516675 260 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AC004486.1-201ENST00000546846 233 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 GTF3AP2-201ENST00000557014 266 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 MIR4659A-201ENST00000580269 81 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 MIR4524B-201ENST00000581569 115 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 ELOCP29-201ENST00000588193 334 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AL078605.1-201ENST00000603529 500 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AC005520.5-201ENST00000613926 164 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.88□□□□□ -1.95
DKK3Q9UBP4 FO624990.1-201ENST00000636373 85 ntBASIC2.88□□□□□ -1.95
DKK3Q9UBP4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
DKK3Q9UBP4 AP006437.1-201ENST00000641440 3685 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 RNU6-212P-201ENST00000362642 104 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AL590135.1-201ENST00000422215 156 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AC019205.3-201ENST00000424573 156 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AC007215.1-201ENST00000464893 276 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 TRBVB-201ENST00000477100 408 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AC136932.1-201ENST00000574771 208 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 MIR4300-201ENST00000581016 96 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 MIR4769-201ENST00000584126 77 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 AC005296.1-201ENST00000616145 209 ntBASIC2.87□□□□□ -1.95
DKK3Q9UBP4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
DKK3Q9UBP4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR335-201ENST00000362173 94 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU1-35P-201ENST00000362782 153 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 SNORD114-19-201ENST00000363072 75 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU6-461P-201ENST00000364195 107 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU6-879P-201ENST00000364328 108 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 SNORD63-201ENST00000384262 68 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AL079342.1-201ENST00000401460 267 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RPL21P38-201ENST00000418090 167 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AC096920.1-201ENST00000423991 241 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 WARS2P1-201ENST00000429678 537 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RPS23P5-201ENST00000495419 428 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 SNORA31.16-201ENST00000516773 139 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.86□□□□□ -1.95
DKK3Q9UBP4 CYP4A27P-201ENST00000567218 190 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR4446-201ENST00000578505 67 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 AC090115.4-201ENST00000609970 188 ntBASIC2.86□□□□□ -1.95
DKK3Q9UBP4 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms