Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 SNORA48.11-201ENST00000517015 89 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 AC026470.2-201ENST00000561492 181 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.53□□□□□ -2
HDAC6Q9UBN7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
HDAC6Q9UBN7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC6Q9UBN7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
HDAC6Q9UBN7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 RNU6-17P-201ENST00000384245 107 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 RNU6-18P-201ENST00000384527 107 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 SNORA64-201ENST00000384674 134 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 MIR221-201ENST00000385135 110 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 AL591806.2-201ENST00000433122 173 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 AC027575.1-201ENST00000481064 460 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 MIR4719-201ENST00000585233 84 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 U4atac.1-201ENST00000618345 95 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.52□□□□□ -2.01
HDAC6Q9UBN7 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 SNORA46.1-201ENST00000391069 153 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 MIR190B-201ENST00000401119 79 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AC144568.1-201ENST00000520139 137 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AC015712.3-201ENST00000559380 164 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AL080274.1-201ENST00000605565 220 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AL138825.1-201ENST00000618587 192 ntBASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
HDAC6Q9UBN7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 SNORD42.2-201ENST00000365570 69 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 SNORA6-201ENST00000384033 151 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 SNORA67.3-201ENST00000384366 140 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 MIR32-201ENST00000384965 70 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 MIR559-201ENST00000385188 96 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 IFNA11P-201ENST00000446352 526 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 AC007215.1-201ENST00000464893 276 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 SNORD116.3-201ENST00000517176 78 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 MIR2355-201ENST00000517199 87 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 AC010928.2-201ENST00000588017 287 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 RNU1-115P-201ENST00000365329 160 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 RNU6-541P-201ENST00000384709 110 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR561-201ENST00000385216 97 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR1302-11-201ENST00000408051 138 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR1302-9-201ENST00000408365 138 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR1302-10-201ENST00000408734 138 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MTCO2P12-201ENST00000427426 682 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 Z82188.1-201ENST00000436709 154 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 snoU13.6-201ENST00000458785 104 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR2053-201ENST00000459295 91 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 SNRPGP20-201ENST00000604477 205 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 AC025754.2-201ENST00000606491 432 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MIR1302-2-201ENST00000607096 138 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 AC134503.1-201ENST00000633048 54 ntBASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HDAC6Q9UBN7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC6Q9UBN7 BX322639.1-202ENST00000423987 2213 ntBASIC2.48□□□□□ -2.01
HDAC6Q9UBN7 AL596028.1-201ENST00000326971 197 ntBASIC2.48□□□□□ -2.01
HDAC6Q9UBN7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.48□□□□□ -2.01
HDAC6Q9UBN7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.48□□□□□ -2.01
HDAC6Q9UBN7 RNU6-280P-201ENST00000364145 104 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms