Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RPL19P1-201ENST00000411635 428 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 AC012306.1-201ENST00000423267 114 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 AC019205.3-201ENST00000424573 156 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 RPS12P18-201ENST00000442381 270 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 MRPS10P1-201ENST00000448483 130 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 SEPT14P8-201ENST00000508026 178 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 RNU7-110P-201ENST00000516891 62 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 CBX3P4-201ENST00000538909 354 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 GTF3AP2-201ENST00000557014 266 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 ELOCP29-201ENST00000588193 334 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 MZT1P2-201ENST00000604387 248 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 SNORD113-5-201ENST00000607261 78 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 AC137590.2-201ENST00000619709 240 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.88□□□□□ -1.95
LRIT1Q9P2V4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.83-201ENST00000363005 113 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RNU6-137P-201ENST00000363680 108 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.180-201ENST00000363867 113 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RNU6-886P-201ENST00000384319 105 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RNU6-493P-201ENST00000391321 108 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RPS26P42-201ENST00000413485 326 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AL513477.1-202ENST00000417061 214 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AL135938.1-201ENST00000443141 297 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AC009237.7-201ENST00000447357 229 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
LRIT1Q9P2V4 ZNF204P-201ENST00000416749 2397 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 MIR411-201ENST00000362239 96 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RNU6-529P-201ENST00000363383 104 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RNU6-326P-201ENST00000365480 107 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 Z96811.1-201ENST00000445880 108 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RPS27P29-201ENST00000463110 252 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC107393.1-201ENST00000512403 346 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RNU2-31P-201ENST00000516954 155 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AP002001.1-203ENST00000534002 267 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 RPL21P9-201ENST00000556149 474 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC006023.1-201ENST00000603944 259 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 SNORD98-201ENST00000636377 67 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AC010889.1-201ENST00000566193 2666 ntBASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
LRIT1Q9P2V4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.199-201ENST00000364014 102 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 RNU6-805P-201ENST00000365643 106 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 MTCO1P5-201ENST00000433573 344 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AC008749.1-201ENST00000597650 306 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 RPL12P50-201ENST00000603116 116 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 AC010999.1-201ENST00000611856 324 ntBASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LRIT1Q9P2V4 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 AC026241.1-201ENST00000517873 2142 ntBASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 MIR148B-201ENST00000362252 99 ntBASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 Y_RNA.101-201ENST00000363154 102 ntBASIC2.84□□□□□ -1.95
LRIT1Q9P2V4 RNU6-774P-201ENST00000363238 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms