Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 SNORA33.2-201ENST00000365413 134 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 Y_RNA.364-201ENST00000365532 101 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 Y_RNA.496-201ENST00000384444 101 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 MIR625-201ENST00000385047 85 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 MIR549A-201ENST00000385268 96 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 AC004386.2-201ENST00000441858 148 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
LRFN1Q9P244 MTCO3P8-201ENST00000453691 755 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
LRFN1Q9P244 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.53□□□□□ -2
LRFN1Q9P244 RPS27AP9-201ENST00000477681 438 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 AP004217.1-201ENST00000480579 346 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RNU7-4P-201ENST00000516961 62 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 RN7SKP295-201ENST00000517264 153 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.53□□□□□ -2
LRFN1Q9P244 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.53□□□□□ -2
LRFN1Q9P244 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 AC022202.1-201ENST00000613515 211 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.53□□□□□ -2
LRFN1Q9P244 AC091925.1-201ENST00000623204 462 ntBASIC2.53□□□□□ -2
LRFN1Q9P244 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LRFN1Q9P244 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.53□□□□□ -2.01
LRFN1Q9P244 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRFN1Q9P244 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-874P-201ENST00000362390 105 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 Y_RNA.106-201ENST00000363189 100 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-280P-201ENST00000364145 104 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 SNORD31B-201ENST00000364977 69 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 MIR1262-201ENST00000408276 93 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC004866.1-201ENST00000411748 78 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC099799.1-201ENST00000439809 192 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 MTND4P19-201ENST00000446659 478 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC016925.1-201ENST00000458303 298 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-1114P-201ENST00000516022 107 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-991P-201ENST00000516168 107 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-988P-201ENST00000519081 107 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC091544.4-201ENST00000555268 342 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 MIR4446-201ENST00000578505 67 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 MIR5006-201ENST00000583027 110 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC016925.2-201ENST00000605108 242 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC007485.1-201ENST00000616755 206 ntBASIC2.52□□□□□ -2.01
LRFN1Q9P244 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
LRFN1Q9P244 RNU6-873P-201ENST00000363833 107 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 Y_RNA.428-201ENST00000384078 102 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 RNY1P14-201ENST00000384426 108 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 MIR10B-201ENST00000385011 110 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 RNU6-1156P-201ENST00000410365 100 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 MCFD2P1-201ENST00000417812 300 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 MRPS18CP6-201ENST00000423587 223 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
LRFN1Q9P244 USP9YP16-201ENST00000430287 407 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AL160004.2-201ENST00000432935 350 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.51□□□□□ -2.01
LRFN1Q9P244 USP9YP23-201ENST00000455085 407 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 RNU7-87P-201ENST00000459343 62 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.51□□□□□ -2.01
LRFN1Q9P244 RNU6-344P-201ENST00000516635 111 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 SNORD116.3-201ENST00000517176 78 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AC091144.1-201ENST00000519573 138 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.51□□□□□ -2.01
LRFN1Q9P244 AL031274.2-201ENST00000599419 203 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AC006157.1-201ENST00000611750 366 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 AC083806.3-201ENST00000614016 455 ntBASIC2.51□□□□□ -2.01
LRFN1Q9P244 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LRFN1Q9P244 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRFN1Q9P244 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LRFN1Q9P244 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 Y_RNA.148-201ENST00000363557 117 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 Y_RNA.422-201ENST00000384054 114 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR606-201ENST00000384851 96 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 MIR300-201ENST00000401138 83 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.5□□□□□ -2.01
LRFN1Q9P244 AC245102.2-201ENST00000448956 180 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 AC105758.1-201ENST00000506038 399 ntBASIC2.5□□□□□ -2.01
LRFN1Q9P244 AC144568.1-201ENST00000520139 137 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms