Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR3976-201ENST00000606807 139 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 HULC.1-201ENST00000612720 240 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL136221.1-201ENST00000621449 509 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 Z69908.1-201ENST00000622603 247 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AP000568.1-201ENST00000282964 442 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU4-48P-201ENST00000365559 182 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-245P-201ENST00000384020 107 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-505P-201ENST00000384427 107 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-606P-201ENST00000384721 111 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 GTF2IP13-201ENST00000438487 386 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 USP9YP29-201ENST00000445112 563 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RNU6-261P-201ENST00000459506 102 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC010531.2-201ENST00000465012 153 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 RPL39P5-202ENST00000512505 151 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 MTND3P5-201ENST00000512798 333 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 LRRC34P2-201ENST00000514850 553 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 SCARNA24.1-201ENST00000516465 137 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC106038.2-201ENST00000520706 568 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC006362.1-201ENST00000567392 174 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 MIR5006-201ENST00000583027 110 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC073648.5-201ENST00000603502 305 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AC008250.2-201ENST00000615261 205 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 AL450472.1-202ENST00000637286 180 ntBASIC0.67□□□□□ -2.3
CCDC88CQ9P219 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CCDC88CQ9P219 SNORD115-7-201ENST00000365306 82 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 Y_RNA.374-201ENST00000365606 101 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 RNA5SP467-201ENST00000391274 118 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CCDC88CQ9P219 RNU2-29P-201ENST00000410423 189 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC88CQ9P219 snoU13.30-201ENST00000458951 104 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC099513.1-201ENST00000490423 301 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC011406.1-201ENST00000512440 370 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC016256.1-201ENST00000547971 354 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AL590229.1-201ENST00000603497 542 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 RPL17P51-201ENST00000605218 238 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC027335.2-201ENST00000624030 375 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AC010487.4-201ENST00000637027 61 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 AL159152.1-201ENST00000635019 2587 ntBASIC0.66□□□□□ -2.3
CCDC88CQ9P219 RNU6-82P-201ENST00000363970 107 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 RNY3P10-201ENST00000384764 102 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
CCDC88CQ9P219 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AL117339.3-201ENST00000418733 162 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC123900.1-201ENST00000420390 96 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC060773.1-201ENST00000421698 310 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 MTCYBP8-201ENST00000422855 651 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AL669831.1-202ENST00000428504 417 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 RPL31P35-201ENST00000431058 377 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.65□□□□□ -2.3
CCDC88CQ9P219 MTND3P16-201ENST00000452205 344 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 RPS29P27-201ENST00000463711 170 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 RPS26P45-201ENST00000471748 340 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.65□□□□□ -2.3
CCDC88CQ9P219 Y_RNA.717-201ENST00000517106 92 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 EIF4A1P12-201ENST00000551910 141 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 SNORA77B-201ENST00000578179 125 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC002044.1-201ENST00000606707 158 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC064807.4-201ENST00000607201 407 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AL360219.1-201ENST00000610230 366 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AC012676.2-201ENST00000619258 186 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 AL359697.1-201ENST00000624879 587 ntBASIC0.65□□□□□ -2.3
CCDC88CQ9P219 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RNU6-552P-201ENST00000362869 119 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 SNORA63D-201ENST00000364359 132 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 SNORA29-201ENST00000384183 140 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RNU6-933P-201ENST00000384424 107 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RNU6-1127P-201ENST00000384580 107 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC88CQ9P219 CDK8P2-201ENST00000415020 547 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 C8orf59P1-201ENST00000429930 303 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AC099677.2-201ENST00000436385 175 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 HSPE1P9-201ENST00000440046 311 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 MTCO2P3-201ENST00000442543 421 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RPS27P22-201ENST00000478056 241 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AC097473.1-201ENST00000508142 408 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RN7SKP88-201ENST00000516847 250 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 MTND4P7-201ENST00000523876 130 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 MRPS36P4-201ENST00000534436 298 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 AL157687.1-201ENST00000554853 619 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 MTND3P12-201ENST00000559068 328 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 MIR3941-201ENST00000582572 103 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 FGF7P1-201ENST00000582820 288 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 U2.17-201ENST00000611454 95 ntBASIC0.65□□□□□ -2.31
CCDC88CQ9P219 7SK.8-201ENST00000612110 250 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms