Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.19□□□□□ -2.6
CCDC180Q9P1Z9 ZNF885P-201ENST00000420174 1098 ntBASIC-1.19□□□□□ -2.6
CCDC180Q9P1Z9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 RNU6-994P-201ENST00000410507 111 ntBASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 SNRPEP8-201ENST00000442866 260 ntBASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 MTND5P13-201ENST00000513046 1079 ntBASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 AC093303.1-201ENST00000514549 295 ntBASIC-1.2□□□□□ -2.6
CCDC180Q9P1Z9 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 USP9YP25-201ENST00000457708 443 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 RNU6-927P-201ENST00000516199 100 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 AC246785.4-201ENST00000605374 287 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 AL355073.2-201ENST00000612106 557 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 AL391903.3-201ENST00000612158 163 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 AC068792.1-201ENST00000621354 417 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 AC131159.1-201ENST00000621854 213 ntBASIC-1.21□□□□□ -2.6
CCDC180Q9P1Z9 MTND4P21-201ENST00000453886 1357 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 MTND1P14-201ENST00000427400 950 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 AL390208.1-201ENST00000605885 644 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 AC007014.2-201ENST00000615581 479 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 AL356596.1-201ENST00000624230 379 ntBASIC-1.22□□□□□ -2.6
CCDC180Q9P1Z9 RNU6-161P-201ENST00000363051 106 ntBASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 AC010154.1-201ENST00000425857 269 ntBASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 AC010153.1-201ENST00000432862 727 ntBASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.22□□□□□ -2.61
CCDC180Q9P1Z9 SNORD113.3-201ENST00000364630 78 ntBASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 MIR760-201ENST00000390220 80 ntBASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 AC005042.3-201ENST00000453230 174 ntBASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 RPL39P34-201ENST00000477141 156 ntBASIC-1.23□□□□□ -2.61
CCDC180Q9P1Z9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-843P-201ENST00000384454 104 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 MIR1207-201ENST00000408249 87 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 FABP5P15-201ENST00000453566 214 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 AC105029.1-201ENST00000520250 669 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 MIR4441-201ENST00000582623 100 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 AC009268.2-201ENST00000621925 457 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 AC106754.1-201ENST00000562632 1513 ntBASIC-1.24□□□□□ -2.61
CCDC180Q9P1Z9 SNORD32A-201ENST00000364805 84 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 SNORD41-201ENST00000386967 70 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 FCF1P10-201ENST00000407590 479 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 AC007215.1-201ENST00000464893 276 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 RNU7-129P-201ENST00000516128 62 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 SNORD116-30-201ENST00000516468 85 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 RNU2-60P-201ENST00000517290 128 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 MTND2P7-201ENST00000521337 640 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 TMF1P1-201ENST00000576058 373 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 AC079610.2-201ENST00000604818 690 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 AC093875.1-201ENST00000623688 504 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 AL590396.2-201ENST00000636511 1041 ntBASIC-1.25□□□□□ -2.61
CCDC180Q9P1Z9 MIR655-201ENST00000362159 97 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RNU6-199P-201ENST00000362954 107 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 SNORA72.2-201ENST00000365028 127 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 SNORA26.3-201ENST00000391119 136 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RNA5SP390-201ENST00000410191 113 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RPL17P19-201ENST00000489069 552 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RN7SKP19-201ENST00000516016 252 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 DEFB131D-201ENST00000526803 184 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 DEFB131C-201ENST00000528817 165 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 MIR3115-201ENST00000577915 68 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AL590491.3-201ENST00000610731 82 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 U4.2-201ENST00000618561 85 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 MIR101-2-201ENST00000362195 79 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RNU1-76P-201ENST00000362903 159 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 RNU4-16P-201ENST00000364737 141 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 MIR520G-201ENST00000385064 90 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 MIR520H-201ENST00000385126 88 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AL356583.2-201ENST00000426536 280 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 DEFB130D-201ENST00000426866 237 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AC092170.1-201ENST00000440211 356 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 MTND2P33-201ENST00000506452 1031 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AC090572.1-201ENST00000519251 160 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AC023824.3-201ENST00000569003 562 ntBASIC-1.26□□□□□ -2.61
CCDC180Q9P1Z9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms