Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL590240.4-201ENST00000616908 390 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 MIR3674-201ENST00000636576 68 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.76-201ENST00000362931 109 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.200-201ENST00000364018 102 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 RNA5SP139-201ENST00000364340 117 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 MIR483-201ENST00000385070 76 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 RNA5SP475-201ENST00000410568 110 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AL353705.1-201ENST00000433468 480 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 MTCO1P5-201ENST00000433573 344 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC006028.1-201ENST00000438379 402 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC091959.1-201ENST00000495857 238 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 RNU6-155P-201ENST00000516347 100 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 RNU6-344P-201ENST00000516635 111 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 SNORD11B-201ENST00000607707 90 ntBASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KCMF1Q9P0J7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC092593.1-201ENST00000515413 1815 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 RNU6-1310P-201ENST00000384153 107 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 MIR1298-201ENST00000408783 112 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AL139156.1-201ENST00000412785 841 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC009237.7-201ENST00000447357 229 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC115115.1-201ENST00000449927 248 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 SNORA74D-201ENST00000516404 141 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 RNU6-182P-201ENST00000516970 105 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 SNORA81.3-201ENST00000517283 198 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 MIR3145-201ENST00000580727 82 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AL162424.1-201ENST00000602325 221 ntBASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.03□□□□□ -1.92
KCMF1Q9P0J7 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RNU6-486P-201ENST00000363116 107 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.117-201ENST00000363294 101 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.136-201ENST00000363444 102 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 MIR548I3-201ENST00000408378 149 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 MIR548I1-201ENST00000408810 149 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RNU4-47P-201ENST00000410876 114 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 PIGPP3-201ENST00000425307 415 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RNU1-143P-201ENST00000516296 146 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.679-201ENST00000516416 91 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 U1.23-201ENST00000610293 146 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 RNU1-68P-201ENST00000615382 146 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 U1.39-201ENST00000621562 146 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 AC068205.3-201ENST00000636385 468 ntBASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KCMF1Q9P0J7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.29-201ENST00000362570 113 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.83-201ENST00000363005 113 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.199-201ENST00000364014 102 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.275-201ENST00000364726 110 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1264P-201ENST00000383891 107 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.785-201ENST00000384290 109 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.590-201ENST00000410140 107 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RNU2-54P-201ENST00000410299 190 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.597-201ENST00000410463 100 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RNA5SP504-201ENST00000410676 117 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RNU6-651P-201ENST00000411040 105 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RNU6-1199P-201ENST00000411249 104 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 PRELID3BP1-201ENST00000457142 540 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 RN7SL504P-201ENST00000494496 287 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 Y_RNA.700-201ENST00000516806 100 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AL512605.2-201ENST00000592972 256 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 YPEL5P2-201ENST00000605553 359 ntBASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.01□□□□□ -1.93
KCMF1Q9P0J7 AC107294.3-201ENST00000609211 526 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms