Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AC016256.1-201ENST00000547971 354 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AL359198.2-201ENST00000611836 194 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC091932.3-201ENST00000624223 323 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC006386.2-201ENST00000624491 75 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 AC012005.1-201ENST00000624575 75 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMCD1Q9NZU5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 RNU6-1272P-201ENST00000362776 107 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 SNORD115-8-201ENST00000363856 82 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 SNORD115-38-201ENST00000365037 82 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 RNU1-100P-201ENST00000365255 165 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 FTH1P15-201ENST00000406984 280 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 AC063976.4-201ENST00000421971 163 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MTCO1P44-201ENST00000441935 243 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 AC125238.1-201ENST00000448842 249 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MTATP6P7-201ENST00000453315 681 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 RNA5SP208-201ENST00000516156 78 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MIR4431-201ENST00000579990 94 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 AL356157.2-201ENST00000605122 111 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 FTX_3.1-201ENST00000610451 147 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
LMCD1Q9NZU5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 Y_RNA.179-201ENST00000363844 90 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 RNU6-301P-201ENST00000384277 107 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 MIR493-201ENST00000385254 89 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 RNU6-1199P-201ENST00000411249 104 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 DBIP2-201ENST00000419076 262 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 VDAC1P3-201ENST00000434069 851 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 AC112220.1-201ENST00000434628 355 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 AL121594.1-201ENST00000475906 575 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 RNU5E-3P-201ENST00000515913 68 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 RNA5SP341-201ENST00000516261 117 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 RNA5SP76-201ENST00000516277 87 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 Y_RNA.712-201ENST00000517011 92 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 MIR7153-201ENST00000637758 57 ntBASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LMCD1Q9NZU5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RNU6-778P-201ENST00000363269 103 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RNU6-727P-201ENST00000363592 107 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RNU6-884P-201ENST00000363889 107 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 AL512633.1-201ENST00000399931 655 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 Z75741.1-201ENST00000446793 314 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RPS20P10-201ENST00000451209 253 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RN7SKP179-201ENST00000516126 217 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 AC022616.8-201ENST00000533569 253 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 CR383656.8-201ENST00000549046 145 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 AC011603.4-201ENST00000611325 277 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 snoZ196.1-201ENST00000625269 89 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 U2.21-201ENST00000637295 81 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
LMCD1Q9NZU5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.71□□□□□ -1.81
LMCD1Q9NZU5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 RNU6-50P-201ENST00000362356 103 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 SNORD73B-201ENST00000364394 72 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 RNU6-1141P-201ENST00000364520 107 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 HMGN2P30-201ENST00000423237 256 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 AC244670.1-201ENST00000436879 112 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 U8.19-201ENST00000459095 133 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 RPL30P12-201ENST00000474666 353 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 Y_RNA.797-201ENST00000515977 94 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 RNA5SP54-201ENST00000516951 92 ntBASIC3.71□□□□□ -1.82
LMCD1Q9NZU5 SNORA31.23-201ENST00000517219 133 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms