Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AP000560.1-201ENST00000624150 1937 ntBASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCAL1Q9NZC9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC117470.1-201ENST00000381974 330 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.459-201ENST00000384251 102 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.557-201ENST00000384680 107 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 RNA5SP338-201ENST00000410495 85 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC114482.1-201ENST00000418010 247 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC112492.4-201ENST00000456549 352 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 RPL23AP94-201ENST00000512518 302 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 RNU2-53P-201ENST00000516257 147 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 MIR3136-201ENST00000583498 78 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AL356280.1-201ENST00000603614 379 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AL034555.1-201ENST00000604816 211 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 RMST_6.1-201ENST00000611980 203 ntBASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCAL1Q9NZC9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-655P-201ENST00000362858 107 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 SNORD115-32-201ENST00000364079 82 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-541P-201ENST00000384709 110 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 MIR218-1-201ENST00000384999 110 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 MIR153-2-201ENST00000385225 87 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 EIF4EP4-201ENST00000424916 578 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AL139109.1-201ENST00000455491 297 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AP000870.1-201ENST00000472927 406 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 ANXA2P1-201ENST00000505539 926 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC234781.5-201ENST00000508429 271 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-764P-201ENST00000516396 105 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.720-201ENST00000517166 92 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC027288.2-201ENST00000553028 243 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 UBL5P4-201ENST00000562584 236 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC023824.2-201ENST00000566185 400 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 VN1R91P-201ENST00000594377 169 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC136443.5-201ENST00000603741 370 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.36□□□□□ -2.03
SMARCAL1Q9NZC9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 OR56A5-201ENST00000340110 738 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RNU4-15P-201ENST00000362613 141 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 SNORA38-201ENST00000363946 132 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 SNORD14.1-201ENST00000365609 90 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.424-201ENST00000384063 103 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-378P-201ENST00000384324 107 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 MIR628-201ENST00000385229 95 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-823P-201ENST00000391042 103 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 CBX3P9-201ENST00000402326 552 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RPL23AP7-203ENST00000449021 469 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 MTATP8P1-201ENST00000467115 207 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 AC140059.1-201ENST00000489238 361 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 MYL12BP1-201ENST00000569826 507 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 RPL30P11-203ENST00000598995 310 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 CTSLP2-204ENST00000629029 392 ntBASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SMARCAL1Q9NZC9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-26P-201ENST00000383985 107 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 Y_RNA.455-201ENST00000384230 98 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MIR208B-201ENST00000401172 77 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 RNU6-101P-201ENST00000410323 104 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AL590556.1-201ENST00000423231 483 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 MTND5P22-201ENST00000458380 195 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC107032.1-201ENST00000485945 480 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.03
SMARCAL1Q9NZC9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms