Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.98□□□□□ -2.09
NDE1Q9NXR1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU1-23P-201ENST00000363361 144 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNY3P11-201ENST00000364153 102 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU4-9P-201ENST00000364951 139 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-308P-201ENST00000390957 107 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNA5SP201-201ENST00000410316 124 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AC092423.1-201ENST00000430165 186 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.97□□□□□ -2.09
NDE1Q9NXR1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AC080013.2-201ENST00000460866 323 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 CKS1BP2-201ENST00000497342 240 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-965P-201ENST00000516721 96 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-307P-201ENST00000516743 106 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-699P-201ENST00000517081 110 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 RNU6-586P-201ENST00000517265 104 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AP002770.2-201ENST00000543613 532 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AC091544.4-201ENST00000555268 342 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 CYP4A27P-201ENST00000567218 190 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 MIR5701-3-201ENST00000578890 82 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 MIR3923-201ENST00000579521 83 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AC005899.2-201ENST00000584353 90 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 MIR5701-1-201ENST00000585138 82 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AL355802.3-201ENST00000607571 545 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 MIR5701-2-201ENST00000615634 82 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 AL449363.1-201ENST00000617815 186 ntBASIC1.97□□□□□ -2.09
NDE1Q9NXR1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 U8.10-201ENST00000384260 133 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 SNORA12.2-201ENST00000391040 156 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AL121890.1-201ENST00000435457 205 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AC007677.1-201ENST00000445757 515 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AC108938.1-201ENST00000451204 136 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 snoU13.30-201ENST00000458951 104 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 RPL17P19-201ENST00000489069 552 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 RNU6-264P-201ENST00000517134 104 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 HSPE1P18-201ENST00000517602 280 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AC004584.2-201ENST00000570407 410 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.96□□□□□ -2.1
NDE1Q9NXR1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 MIR5739-201ENST00000619803 80 ntBASIC1.96□□□□□ -2.1
NDE1Q9NXR1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.431-201ENST00000384086 102 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RPS20P15-201ENST00000412792 311 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RN7SKP210-201ENST00000459176 261 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RNU7-87P-201ENST00000459343 62 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 UBL5P3-201ENST00000475112 231 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RNU7-175P-201ENST00000515915 61 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC016256.1-201ENST00000547971 354 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC016727.2-201ENST00000603988 621 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AL355297.2-201ENST00000604792 129 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AL080274.1-201ENST00000605565 220 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 AC090971.5-201ENST00000621102 293 ntBASIC1.95□□□□□ -2.1
NDE1Q9NXR1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.11-201ENST00000362375 109 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 RNU6-700P-201ENST00000391043 107 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 MTCYBP2-201ENST00000407745 171 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL354751.2-201ENST00000415471 210 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AC003685.2-201ENST00000422795 395 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL590556.1-201ENST00000423231 483 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 MTND1P14-201ENST00000427400 950 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 MTCO2P12-201ENST00000427426 682 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AC096644.2-201ENST00000429278 159 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL161788.1-201ENST00000441805 169 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms