Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MIR549A-201ENST00000385268 96 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 MIR320B2-201ENST00000408479 138 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 RPL23AP36-201ENST00000413895 458 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 MTCO2P19-201ENST00000427513 598 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 HMGN2P34-201ENST00000437647 269 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.36□□□□□ -2.19
HPF1Q9NWY4 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 MTCO3P38-201ENST00000468910 766 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.36□□□□□ -2.19
HPF1Q9NWY4 CENPUP1-201ENST00000526649 1202 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.36□□□□□ -2.19
HPF1Q9NWY4 SCOCP1-201ENST00000554676 349 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 CYP3A52P-201ENST00000563326 91 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 SNRPGP20-201ENST00000604477 205 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.36□□□□□ -2.19
HPF1Q9NWY4 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 AL357078.3-201ENST00000607528 618 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 AC103705.1-201ENST00000619013 241 ntBASIC1.36□□□□□ -2.19
HPF1Q9NWY4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 Y_RNA.296-201ENST00000364930 108 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 MIR1253-201ENST00000408273 105 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC092447.3-201ENST00000426027 686 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 RPS3AP17-201ENST00000472594 777 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AL163540.1-201ENST00000485382 386 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 RNU6-1069P-201ENST00000516612 133 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC007684.1-201ENST00000609671 477 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 AC068792.1-201ENST00000621354 417 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 Z69908.1-201ENST00000622603 247 ntBASIC1.35□□□□□ -2.19
HPF1Q9NWY4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HPF1Q9NWY4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HPF1Q9NWY4 RNU1-62P-201ENST00000362599 164 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 RNA5SP323-201ENST00000391094 133 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
HPF1Q9NWY4 CDK8P2-201ENST00000415020 547 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
HPF1Q9NWY4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.34□□□□□ -2.19
HPF1Q9NWY4 MTCO3P8-201ENST00000453691 755 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 RNU6-956P-201ENST00000458868 103 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 HMGN1P12-201ENST00000499125 195 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 HMGB1P29-201ENST00000505659 499 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 RN7SKP298-201ENST00000515950 94 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HPF1Q9NWY4 MIR4498-201ENST00000577599 66 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 FGF7P1-201ENST00000582820 288 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 AL158063.1-201ENST00000615349 536 ntBASIC1.34□□□□□ -2.19
HPF1Q9NWY4 Y_RNA.1-201ENST00000352915 104 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 SNORA33-201ENST00000363664 130 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 Y_RNA.381-201ENST00000365666 102 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 MIR586-201ENST00000385035 97 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RPL37P10-201ENST00000412884 288 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AL606489.2-201ENST00000433886 234 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.33□□□□□ -2.2
HPF1Q9NWY4 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNA5SP401-201ENST00000515920 127 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 SNORA19.2-201ENST00000516013 114 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 SNORA40.12-201ENST00000516329 111 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.33□□□□□ -2.2
HPF1Q9NWY4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.33□□□□□ -2.2
HPF1Q9NWY4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RNU6-417P-201ENST00000384712 107 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RNU6-57P-201ENST00000411348 103 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 AL359672.1-201ENST00000442302 409 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RPL31P58-201ENST00000469001 379 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RNU6-1038P-201ENST00000516516 104 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 AL442163.3-201ENST00000554110 156 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.32□□□□□ -2.2
HPF1Q9NWY4 AC121247.2-201ENST00000604776 136 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 RMST_3.1-201ENST00000611651 109 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
HPF1Q9NWY4 AC009033.1-201ENST00000624279 431 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms